Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04148 ATGGCTTCTGCTTGTGCTTCTTCTGCCATTACAGCTGTTGCCATCTCTACTCCAAGTTCTCAGAAGAATGGATCACCCTTGGGACCCTCAAAAGCTTTTCTTGGGAGGAAACTGAAAGTGAATAACAGCACTGCATCATCTTCTAGAGTAAGATCTACTACAATTGTGTGTACAGTTGCTGAGCCTGATAGACCTCTGTGGTTCCCTGGTAGCACCCCTCCTCCATGGCTTGATGGAAGTCTCCCAGGAGATTTTGGATTTGATCCTCTTGGTCTTGGATCTGATCCAGAGAGTTTGAGGTGGAATGTTCAAGCTGAGCTTGTACACTGCAGATGGGCAATGTTAGGTGCAGCTGGAATTTTCATTCCAGAATTCCTAACAAAGATTGGCATCTTGAACACACCATCATGGTATACTGCTGGAGAGCAAGAGTATTTCACAGACACTACCACACTCTTCATAGTCGAGCTTCTTTTCATCGGTTGGGCCGAGGGAAGAAGATGGGCTGACATCCTCAATCCAGGCTGTGTCAACACCGACCCTATCTTTCCAAACAACAAGCTCACAGGAACTGATGTAGGGTACCCTGGTGGACTTTGGTTTGATCCATTGGGTTGGGGAAATGCCTCTCCTCAGAAGCTTAAGGAGTTGAGAACTAAGGAGATTAAGAATGGGAGATTGGCTATGTTGGCTGTTATGGGAGCTTGGTTCCAGCACATTTACACCGGCACTGGTCCTATCGATAACCTCTTTGCTCACCTTGCTGATCCCGGTCACGCTACTATTTTTGCTGCTTTCACTCCATAG 807 0.4684 MASACASSAITAVAISTPSSQKNGSPLGPSKAFLGRKLKVNNSTASSSRVRSTTIVCTVAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELLFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGNASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04148 268 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Vivi7g04148 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 266 IPR001344 GO:0009765|GO:0016020
Vivi7g04148 268 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Vivi7g04148 268 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Vivi7g04148 268 SUPERFAMILY Chlorophyll a-b binding protein 60 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04148 Vivi-Chr7 108663985 108683190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04148 54 268 Chloroplast and Mitochondria Gene Families AT3G61470 88.837 2.52e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04148 K08908 - gmx:100784089 489.574