Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04144 ATGAGATCAAACCCTCCATCAACATCACAACCACCCTCCAACTCTTCCAACACTTACATAATTTTCTCCAAACTAATGGTCTCAATCACAACAACAACCTTATTTCTAACCTTCTTCCTTGTTCATGTCTCTTCCTCTTGTAACCAAATTGACAAAGATTCACTCTTGTCTTTCTCCTCAAATATCTCTACTTTTTCACCTCACCCACCTCTCAACTGGTCGTCTTCTTCTTCTTCCTCTGATTGTTGTGATTGGGAAGGTGTAACTTGTGATCAACAGAATCAACATGTTACTCATCTTTTGTTACCCTCTAGAGGCCTCAATGGTTTCATTTCACTTTCTAGTTTCACTTCTCTTCAATCTCTCTCTCATCTTAATCTCTCTCATAATAAACTTCATGGCAATCTTCAAAATCAGTTTTTTTCAATTCTTAACCATCTTTTAGTTCTTGATTTGAGTTACAATCGGTTCTCTGGTGAATTGCCACTTGGGAATGGAAACAGAAACAGCAGTGTTGTTCAGGTGTTTGATTTGTCTAGTAATTCATTCAATGGAACATTGCCAGTTTCTCTGATTCAGAATCTTGCAGAAGGAGGTAATTTGATAGCTTTCAATGTTAGCAACAACAGTTTCACAGGTTTTATTCCAATTTCAGACTTTTGTGATGTGCATAAGAATTCTTCTTTGAGATTCTTGGATTTTTCTTCCAATGATTTTGATGGTGCTATTGAGATTGGTTTAGGTGCATGTTCTAAGCTTGAGAGATTTAGAGCAGGTTTCAATTTGCTATCAGGGAATATCCCAATTGATGTTTATGATGCTGTTTCACTCATTGAAATATCATTGCCATTGAATAAAATTTATGGAACAATTGGTGATGGAATTGTTAATCTTGTGAATCTCACAGTTTTGGAGCTTTACTCCAATAATTTAACAGGTTCTATTCCTAAGGATATTGGTAAGCTTTTGAAATTGGAGAAGTTGCTTCTTCATGTCAATAATTTGACTGGTACGATTCCGCCGTCTTTGATGAATTGTAACAAGCTCATTATGTTGAATTTGAGGGTTAATAAGTTGGAAGGAAATCTCTCGGCGTTCAATTTCTCGGGATTGGTTGGGCTTGCTACGCTTGATCTTGGTAACAATAGGTTTAGTGGTGTTTTACCGCCGACCCTTTATGATTGCAAGTCGCTTGCTGCATTGAGGCTTGCGTCTAATCATATTGAGGGACAGGTTTCGTCTGAGATACTTGGACTTGAGTCTCTTTCGTTCTTGTCGATTTCTGATAACAAGCTGAAGAATATCACTGGTGCTCTTCGAATACTCACTGGTCTCAAGAAGCTTAGTACACTTATGCTCTCCAAGAATTTTTACGACGAAGTGATGCCGAACGTGATAGAACCTGACGGATTCCAAAATATCCAAGTTTTAGGATTAGGTGGCTGTTATTTCACAGGTCAAATACCGAGTTGGCTTAAAAACCTGATGAAACTTGAGGCTTTGGACCTTTCGTTTAATCGATTCAACGGTTCGATACCTCCTTGGTTAGGTAAACTGCCTCAGCTTTTCTACATAGACTTGTCTGTTAACCTACTTACTGGCCTGTTTCCGATAGAGCTGACGAAACTCCCGGCGCTAACATCACAACAAGCAAATGATAAAGTTGAAAGGACTTACTTGGAGTTACCTGTCTTTGCTAATGCTAACAATGTTTCTTTGTTGCAATACAATCAACTTTCGAGCCTACCACCGGCAATATATCTCGGAACCAATCGCCTTAGTGGCAGTATCCCCGTCGAGGTCGGTCAACTCATAGTCCTTCTTCAGCTGGACCTGAAGAGAAACAACTTCTCTGGCAATATCCCGGATCAAATTTCAAACTTGATTAACTTAGAGAAACTAGACCTCTCGGAAAACGAACTATCCGGCGAAATTCCTGATTCGCTCAATAAATTGCATTTCTTGTCTTTTTTCAGTGTAGCAGATAATAATCTTCAAGGACGAATACCAACTGGTAGTCAGTTTGATACTTTTTCCAACACCAGCTTTGTAGGAAACTCGCAATTGTGCGGTCTGGTTATTCAGCGCCCTTGTGCTTCTCAACAAAATACTACCGGTACTTCAGCTAGAGGCAAATCCAAAAAAATAATAGTCATACTTATTATCGTAGTGTGTTTCGGCATAGCTACCTTGATTACGTTGTTGACACTGTGGATACTCTCTAAGAGGAGGGTCAATCCAAGAGGAGATTCTGATAAGATTGAACTTGAATCGATTTCTCAGTACTCGAACAGCGGTGTTCATCCAGAGGTTGATAGGGAGGCTAGCCTAGTGGTATTGTTCCCCAGCAAAAACAATGAAACAAAGGATCTTTCGATATTAGAGATCATAAAAGCCACTGAAAATTTCAGTCAAGCAAATATAGTAGGATGTGGCGGTTTCGGTTTGGTTTATAAAGCGTCGTTTCAAAATGGAACTCAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGCCTTATGGAAAGGGAATTTAAAGCAGAAGTAGAAGCTTTGTCAAACGCGCAACATGAGAATCTGGTAGCATTGCAAGGCTACTGTGTGCATGATGGTTATCGACTACTCATATATAATTACATGGAGAACGGAAGTCTCGATTACTGGTTGCATGAAAAGTCCGACGGTGCGTCTCAACTCGATTGGCCGACTCGTTTGAAGATCGCACAAGGAGCAGGTTGTGGTTTGGCCTATTTGCATATGATATGCGAACCGCACATCGTGCACCGTGATATAAAGTCGAGCAATATACTCCTGAACGAGAAGTTCGAGGCACATGTTGCTGATTTCGGGTTGTCGCGGTTGATTCTTCCGTATCATACTCATGTTACAACCGAACTTGTAGGTACATTAGGTTATATTCCTCCGGAGTATGGACAAGCATGGGTGGCGACTCTGAGAGGAGACGTGTACAGCTTCGGAGTTGTTTTGCTCGAGCTTCTCACCGGAAGGAGGCCTATGGATGTATGTAAGCCGAAAATTTCGAGGGATTTGGTTAGCTGGGTTCAACTAATGAAAAAGGAAGAGAAACAAGAACAAGTATTTGACTCGACTCTACGAGGGAAAGGATTTGAAAGCGAGATGCTGCAGGTACTCGATGTAGCATGCTTGTGTGTGAACATGAATCCTTTCAATAGACCAAGCATCAGAGAAGTTGTCGAATGGCTAAAAAATGTGCACAGAAATAATGACTAG 3249 0.4044 MRSNPPSTSQPPSNSSNTYIIFSKLMVSITTTTLFLTFFLVHVSSSCNQIDKDSLLSFSSNISTFSPHPPLNWSSSSSSSDCCDWEGVTCDQQNQHVTHLLLPSRGLNGFISLSSFTSLQSLSHLNLSHNKLHGNLQNQFFSILNHLLVLDLSYNRFSGELPLGNGNRNSSVVQVFDLSSNSFNGTLPVSLIQNLAEGGNLIAFNVSNNSFTGFIPISDFCDVHKNSSLRFLDFSSNDFDGAIEIGLGACSKLERFRAGFNLLSGNIPIDVYDAVSLIEISLPLNKIYGTIGDGIVNLVNLTVLELYSNNLTGSIPKDIGKLLKLEKLLLHVNNLTGTIPPSLMNCNKLIMLNLRVNKLEGNLSAFNFSGLVGLATLDLGNNRFSGVLPPTLYDCKSLAALRLASNHIEGQVSSEILGLESLSFLSISDNKLKNITGALRILTGLKKLSTLMLSKNFYDEVMPNVIEPDGFQNIQVLGLGGCYFTGQIPSWLKNLMKLEALDLSFNRFNGSIPPWLGKLPQLFYIDLSVNLLTGLFPIELTKLPALTSQQANDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGTNRLSGSIPVEVGQLIVLLQLDLKRNNFSGNIPDQISNLINLEKLDLSENELSGEIPDSLNKLHFLSFFSVADNNLQGRIPTGSQFDTFSNTSFVGNSQLCGLVIQRPCASQQNTTGTSARGKSKKIIVILIIVVCFGIATLITLLTLWILSKRRVNPRGDSDKIELESISQYSNSGVHPEVDREASLVVLFPSKNNETKDLSILEIIKATENFSQANIVGCGGFGLVYKASFQNGTQLAIKKLSGDLGLMEREFKAEVEALSNAQHENLVALQGYCVHDGYRLLIYNYMENGSLDYWLHEKSDGASQLDWPTRLKIAQGAGCGLAYLHMICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVLLELLTGRRPMDVCKPKISRDLVSWVQLMKKEEKQEQVFDSTLRGKGFESEMLQVLDVACLCVNMNPFNRPSIREVVEWLKNVHRNND 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04144 1082 Gene3D Ribonuclease Inhibitor 274 365 IPR032675 -
Vivi7g04144 1082 Gene3D Phosphorylase Kinase; domain 1 768 878 - -
Vivi7g04144 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Vivi7g04144 1082 Pfam Protein kinase domain 804 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04144 1082 Gene3D Ribonuclease Inhibitor 50 170 IPR032675 -
Vivi7g04144 1082 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 276 433 - -
Vivi7g04144 1082 Pfam Leucine rich repeat 473 532 IPR001611 GO:0005515
Vivi7g04144 1082 Gene3D Transferase(Phosphotransferase) domain 1 879 1082 - -
Vivi7g04144 1082 FunFam Leucine-rich repeat receptor-like protein kinase 879 1082 - -
Vivi7g04144 1082 ProSiteProfiles Protein kinase domain profile. 803 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04144 1082 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Vivi7g04144 1082 Pfam Leucine rich repeat N-terminal domain 51 91 IPR013210 -
Vivi7g04144 1082 SUPERFAMILY L domain-like 51 280 - -
Vivi7g04144 1082 SUPERFAMILY L domain-like 574 690 - -
Vivi7g04144 1082 SUPERFAMILY L domain-like 221 548 - -
Vivi7g04144 1082 Gene3D Ribonuclease Inhibitor 171 273 IPR032675 -
Vivi7g04144 1082 Gene3D Ribonuclease Inhibitor 366 706 IPR032675 -
Vivi7g04144 1082 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 268 363 - -
Vivi7g04144 1082 FunFam Tyrosine-sulfated glycopeptide receptor 1 368 703 - -
Vivi7g04144 1082 SMART serkin_6 803 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04144 1082 SMART LRR_typ_2 119 143 IPR003591 -
Vivi7g04144 1082 SMART LRR_typ_2 419 441 IPR003591 -
Vivi7g04144 1082 SMART LRR_typ_2 298 322 IPR003591 -
Vivi7g04144 1082 SMART LRR_typ_2 144 166 IPR003591 -
Vivi7g04144 1082 SMART LRR_typ_2 371 395 IPR003591 -
Vivi7g04144 1082 SMART LRR_typ_2 495 519 IPR003591 -
Vivi7g04144 1082 SMART LRR_typ_2 628 652 IPR003591 -
Vivi7g04144 1082 SUPERFAMILY Protein kinase-like (PK-like) 788 1074 IPR011009 -
Vivi7g04144 1082 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04144 Vivi-Chr7 108603925 108607584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04144 34 698 Miscellaneous Gene Families AT1G17240 53.185 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Vivi7g04144 Pkinase 4.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04144 - - gmx:100781943 1558.12