Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04134 ATGTCGGCGGATCCATGGTTGATGCTGATGCTGGTTTTCATCAGTATCTCTACTCTTGTCATCAATGGTGACACAGATCCAAATGATGCCTCTGCTTTAATGGGTTTATATCAAAGTATGAACTCACCGGCTCAGCTAAATTGGCCGGTCAATGGCAACAACGGCAACAACGATCCTTGTGGACAGTCATGGACTGGCATCACTTGCTCAGGCAACCGAATCACAGAAATTAAGTTACCTGGTCATGGACTAACCGGAACTTTGGCTTACCAGATACAATCCTTTTCAGCTCTGACAAACCTAGACATGAGTAACAACAATCTCGCTGGAACTTTGCCGTACCAGTTTCCTCAAAGTTTGCAGCACATAAATCTTGCTAATAATGGTTTCAACGGCGGGATACCTTATTCTTTTTCCGATCTTGCTTCTCTTATAACCCTGAATCTCGGTCACAATCAATTCCAACAAGGACTGTCTTTGAGCTTTCAAAAGCTTACTTCCCTTTCTACATTGGATGTTTCTTTCAATTCTTTAACCGGAGACCTTCCTCAGACGATGAACTCACTTTCAAGCATAAACACCATGTATCTACAAAACAATCAATTTTCAGGAACCATTGATGTCCTTGCGGATCTACCTCTTGATAATTTGAATGTGGAAAACAATCATTTTACAGGATGGATACCAGAACAGTTGAAAAACATAAACCTACAAAAGAGCGGTAATTCATGGAGCTCTGGACCTGCACCCCCGCCTCCTCCTGGTACACCTCCATTACCAAAAGACAAAGGTAGTCATCACAAGTCGGGTGGACATAACAGCCCGTCAGATTCTGGCTCAAGTGACGGAAGCAAAAATTCAGGTATAGGAGGTGGTGCCATTGCTGGAATAGTGATCTCTATCGTAGTCATTGGGGCAATAGTAGCATTCTTTTTGTTGAAGAAAAGATCAAAGAAGAAGAAGTCGTATCCGGATGTGGAAAAGCTAGACAATCAGCCCTTGGCTCCTTCAAATGAAGTTCATGGAATGAATTCGACGCAAACTCCTTCGGTGATTGACTTGAAGGCATTTGATACTTCTGCGGCTGCAATAAGCCTTAAACCCCCTCCTAAATCGTTTGATGAAGATGAGTTTCCAAAGAAGCTCGCTGTAGTTAAGAAGACCGTAGCACCTCCTGCAAATTTGAAATCATATTCAATAGCTGACCTGCAGATTGCTACCGGAAGCTTCAGCGTGGATCATCTTCTCGGCGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGACGACGGAAAGGTTCTTGCCGTGAAGAAGATAGATTCATCTGTCCTTCCCAATAATCTGTCAGATGATTTCATGGAAATAGTTTCAAACCTCTCCCGTTTGCATCATCCCAATGTGACGGAGCTTGAAGGTTATTGTTCTGAGCATGGACAACACCTCTTAGTCTACGAGTTTCACAAAAATGGATCCCTGCATGACTTCCTTCACCTCCCTGATGATTACATTAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGAATCGCACGCGCATTAGAGTACCTACACGAAGTTTGTTCACCGTCAGTTGTTCATAAGAATATAAAGGCAGCAAACATATTACTTGATGCTGATCTGAATCCTCATCTTTCAGACAGTGGATTGGCCAGCTATATTCCAAACGCAAACCAGGTATTGAACAATAATACTGGATCCGGAAACGATGCTCCAGAAGTTGGATTGTCTGGTCAGTATACTCTTAAGAGTGACGTCTACAGCTTTGGAGTCATCATGTTGGAGCTTTTAAGCGGACGCAAACCATTTGATAGCTCAAGGTCGAGGTTTGAACAGTCGTTGGTTCGATGGGCGACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGACTCTACCCTGTCAAGTCTCTTTCTCGATTCGCCGATGTCATTGCACTTTGTGTTCAGCCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCATTGGTTCGGTTAGTGCAGCGAACCAACATGAGCAAACGGACATTTGGAACTGATCAAGGAGGACCCAACCGTGATGATCAAGAAATCCTAGACATGTAA 2142 0.4356 MSADPWLMLMLVFISISTLVINGDTDPNDASALMGLYQSMNSPAQLNWPVNGNNGNNDPCGQSWTGITCSGNRITEIKLPGHGLTGTLAYQIQSFSALTNLDMSNNNLAGTLPYQFPQSLQHINLANNGFNGGIPYSFSDLASLITLNLGHNQFQQGLSLSFQKLTSLSTLDVSFNSLTGDLPQTMNSLSSINTMYLQNNQFSGTIDVLADLPLDNLNVENNHFTGWIPEQLKNINLQKSGNSWSSGPAPPPPPGTPPLPKDKGSHHKSGGHNSPSDSGSSDGSKNSGIGGGAIAGIVISIVVIGAIVAFFLLKKRSKKKKSYPDVEKLDNQPLAPSNEVHGMNSTQTPSVIDLKAFDTSAAAISLKPPPKSFDEDEFPKKLAVVKKTVAPPANLKSYSIADLQIATGSFSVDHLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNNLSDDFMEIVSNLSRLHHPNVTELEGYCSEHGQHLLVYEFHKNGSLHDFLHLPDDYIKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKAANILLDADLNPHLSDSGLASYIPNANQVLNNNTGSGNDAPEVGLSGQYTLKSDVYSFGVIMLELLSGRKPFDSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGPNRDDQEILDM 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04134 713 ProSiteProfiles Protein kinase domain profile. 410 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04134 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 687 IPR046959 -
Vivi7g04134 713 PRINTS Leucine-rich repeat signature 98 111 - -
Vivi7g04134 713 PRINTS Leucine-rich repeat signature 165 178 - -
Vivi7g04134 713 SUPERFAMILY L domain-like 27 234 - -
Vivi7g04134 713 SUPERFAMILY Protein kinase-like (PK-like) 392 682 IPR011009 -
Vivi7g04134 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 255 - -
Vivi7g04134 713 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 374 487 - -
Vivi7g04134 713 MobiDBLite consensus disorder prediction 238 286 - -
Vivi7g04134 713 MobiDBLite consensus disorder prediction 246 260 - -
Vivi7g04134 713 Pfam Leucine rich repeat 97 154 IPR001611 GO:0005515
Vivi7g04134 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 696 - -
Vivi7g04134 713 Gene3D Transferase(Phosphotransferase) domain 1 489 701 - -
Vivi7g04134 713 Gene3D Ribonuclease Inhibitor 26 252 IPR032675 -
Vivi7g04134 713 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Vivi7g04134 713 Gene3D Phosphorylase Kinase; domain 1 376 487 - -
Vivi7g04134 713 MobiDBLite consensus disorder prediction 322 345 - -
Vivi7g04134 713 MobiDBLite consensus disorder prediction 271 286 - -
Vivi7g04134 713 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Vivi7g04134 713 Pfam Protein tyrosine and serine/threonine kinase 412 682 IPR001245 GO:0004672|GO:0006468
Vivi7g04134 713 MobiDBLite consensus disorder prediction 693 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04134 Vivi-Chr7 108376935 108381297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04134 8 699 Strubbelig Receptor Gene Family AT1G53730 64.823 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vivi7g04134 PK_Tyr_Ser-Thr 7.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04134 - - gmx:100780323 1026.93