Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04112 ATGGAAGGTGAAGCTCCATCAATGGAGAATCCCAAAATCTCAGCCTACTATCAAACTCGTCTAGCTCACTTCGGCGTCGTCAGCACCGAGTGGCTAGCTCAGGCTCAGTCCGCAACAAAACCCATCCCATCATCATCAACTGACACACACACTGATAAAGATGCCAATTTTTCCGTAATTGATGAATTCAATAGGTGGCGTAATCATCCCGATTTGGCCGAGGCTGTCGCTGCAATTCGGGCACTCGCCGCTGTTATCAGCTCCAGTAAAGCTTCCACTATGATGCAGCTTGAAATTGAGCTCAAAAACGCCTCTGATACTCTCAAAGCATGGGATACAACCTCTATCTCATTGACAGCGGCGTCTGATCTGTTTATGAGATACGTTACAAGAACATCCGCTTTGGAGTTTGAAGACTTTAATTCTGCAAAAGCTCGCTTGATTGAGCGTGCTGACAAGTTTGGGGAAATCTCCTATAAGGCTCGTAAGGTCATTGGAATGCTTAGTCAAGATTTTATATTTGATGGTTGTACCATTTTGGTTCATGGTTTTTCTAGAGTTGTCTTTGAAGTTCTTAAATTGGCTGCACATAATAAAAAACGATTTCGAGTATTCTGCACAGAGGGGAGACCAGATCGAACAGGTTTAAGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCCGTGAAACTTGTGATAGACTCCGCAGTGGCTTATACTATGGATGATGTGGACATGGTATTTGTCGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATTAATATGATGGGAACATATCAAATTGCGTTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCATTACCCTCTCGACCAAAAGGATTTGGCGCCTGCCCTACGACCAGTTGATTTCGGTGTTCCTATTCCATCCAAGGTTGAGGTTGAATGCTCTGCCCGGGATTATACTCCTCCACAGTATCTGACTTTGCTTTTCACAGATTTAGGCGTTCTAACTCCATCGGTTGTTAGTGATGAACTCATCCAGCTATACTTATAA 1071 0.4398 MEGEAPSMENPKISAYYQTRLAHFGVVSTEWLAQAQSATKPIPSSSTDTHTDKDANFSVIDEFNRWRNHPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDTLKAWDTTSISLTAASDLFMRYVTRTSALEFEDFNSAKARLIERADKFGEISYKARKVIGMLSQDFIFDGCTILVHGFSRVVFEVLKLAAHNKKRFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDDVDMVFVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARHYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04112 356 FunFam Translation initiation factor eIF-2B subunit alpha 55 157 - -
Vivi7g04112 356 Gene3D - 159 356 IPR042529 -
Vivi7g04112 356 Pfam Initiation factor 2 subunit family 70 344 IPR000649 GO:0044237
Vivi7g04112 356 Coils Coil 94 114 - -
Vivi7g04112 356 FunFam Translation initiation factor eIF-2B subunit alpha 160 356 - -
Vivi7g04112 356 Gene3D - 54 157 IPR042528 -
Vivi7g04112 356 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 25 356 - -
Vivi7g04112 356 SUPERFAMILY NagB/RpiA/CoA transferase-like 72 355 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04112 9 356 Eukaryotic Initiation Factors Gene Family AT1G53880 78.933 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04112 K03239 - gmx:102669842 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04112 7 107929175 107933051 Vivi7g04112 7 107929175 107933051 ECH