Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04110 ATGTTGCAGTTTCATTCTCAAGGAGCTTCTAAACAGACTTGTACTGTTCTTGCTGTTACTTCTGATACACGTTCTGTTGAGCAGAAGCTTCCACTGAATCATAGAAAGTATCCTTTCCCTGAGTTGGTTTCTTCGGGGCGTCTTGAGGTGCAAACTCTATGCAATCCGGAAAAGGAACAATTTCGTAAAGTTCTTGAATCGTGTCAGCCGAGTTTTGTTTACTTACAAGGAGAGAAGTTAGTGAACGAGGAAGTTGGTCTATTGGTTTGGCAAGGTGTGGAATTATCCACTCCTGAAGATGTATCAGAGCTCTTTGGTACCACATTGCCGACAGTTGTTTATTTAGAAATCCCCAATGGAGAAAGTTTTGCAGAGGCCCTTCATCTTAAGGGAATCCCATATGTTGTATTTTGGAAGAATGCTTTTTCTCGATATGCTGCCTGCCATTTTCGTCAAGCATTTTTTTCAGTGGTGCAGAGTTCATGTACACATACATGGGATGCTTTCCACCTTGCACATGCTTCTTTCAAACTTTACTGTGTTCAAAATAACCAAGTACTTCCTACTGATAGCGATGATGCTGATAGTGATATGGGGCCACACCTTCTTGGTGACTGTCTCAAAATCAATGTTGACCCTCCAGAGATGGGTGAAGAAGAAGAAGAAGACGATGACGATGATGAAGAAAGTTCCTCCGGCAGTCTTCCTTCTATACAGATTCATGATGATGAAATGAACTTGAGATTTCTTATCTGTGGTGCACCTTCCACTGTTGATGAGTCATTGCTGAGATGTTTGGAGGATGGACTAAGAACTCTTTTAACTATTGAAATACGCGGTTGCAAGCTCCATGGCAAGTATAGCGCCCCTCCACCGCCTCTTCAGGCAGCTTCTTTTTCACGTGGAGTTGTGACCATGCGATGTGATATATCAACCTGCAGTTCTGCACATATCTCACTTCTAGTATCTGGCAGTGCACAAGCCTGTTTTAATGATCAGCTCTTGGAGAATCATATAAAAAATGAGATAATTGAGAAGAGTCAAATAGTTCACGCACAACTCAACAACGAAGTAAACAAACATATTATCTCCGAACCTCGCAGATCTGCTTCAATAGCTTGTGGAGCAACTATATTTGAAATTACCATGAGGCTTCCTCAATGGGCTTTGCAGATTTTGCGACAGCTAGCACCTGATGTTTCTTATCGAAGTTTAGTTGCACTTGGCATTGCTAGTATTCAAGGGTTGCCTGTTGCTTCTTTTGAGAAAGATGATGCGGAGCGCTTACTTTTCTTCTATCAAAGCTCTGAGAAAGATGAATGTGCAAATGGAAATATAGTTTTCAGCAGCCCCCCCATTTGGTTGAAACCTCCCCTTCCTACAAGAAAGAGATGCGAATTAAGCCAAGGGGCTAGCCATGACATACACGATGGGGTCTTTGCAGGGCAGGGTGCTGTTAATAAAGTAGATGGAGAGGAAAAGGATAGAAAAATGGTGAATGGGATTAGTACACCATTAACTCCAGCTAGGCAGAGATTAAAAGTATCTGCTATGAGGCCAATTCCTCATGTTCGTCGCCATAGAATGACACCTTTTTGTGGACCTTCTGAGATAGATAGTTTCGGTGGTGCCCATGTTGAAGCTAATGTGCCACTTATTCCTATGAAGCGCAGTAGTGTTGGAACATCATCCACGGCCCATAGAAAATCATTTTCAAGCTCAGCTCATTCTAAGCAGGTTATTTCATTGAATCCATTACCATTGAAGAAACACGGTTGTAGCAGAGGCCCAGTACAGACTTGCTCTGAGGATGAATTTATTAAAGATGTCATGGAGTTTCTGATTCTCCGAGGGCATAGCCGACTGATTCCACAAGGAGGGCTTTCCGAGTTCCCTGACGCCATTCTGAATGGAAAGCGCCTTGATCTCTACAACCTATATAAAGAGGTGGTCACAAGGGGAGGATTTCATGTTGGCAATGGCATCAACTGGAAGGGGCAAATATTTTCAAAGATGGGAAATTACACATCAACCAATAGAATGACGGGAGTTGGAAATACACTCAAAAGACATTATGAAACCTACCTTTTAGAATATGAATTAGCACACGATGATGTGGATGGAGAATGCTGCTTGTTGTGTCACAGTAGTGCTGCTGGGGATTGGGTGAATTGTGGCATATGTGGTGAGTGGGCTCATTTCGGCTGTGACAGAAGGCAGGGTCTTGGCGCATTTAAGGATTATGCAAAAACAGATGGGTTGGAATATATATGTCCTCATTGTAGTATTACAAATTTCAAGAAGAAACAACATGTTGCTAATGGATATTCGCAAGGGTCAATGTCATCAAGACCCCTTTGA 2361 0.4244 MLQFHSQGASKQTCTVLAVTSDTRSVEQKLPLNHRKYPFPELVSSGRLEVQTLCNPEKEQFRKVLESCQPSFVYLQGEKLVNEEVGLLVWQGVELSTPEDVSELFGTTLPTVVYLEIPNGESFAEALHLKGIPYVVFWKNAFSRYAACHFRQAFFSVVQSSCTHTWDAFHLAHASFKLYCVQNNQVLPTDSDDADSDMGPHLLGDCLKINVDPPEMGEEEEEDDDDDEESSSGSLPSIQIHDDEMNLRFLICGAPSTVDESLLRCLEDGLRTLLTIEIRGCKLHGKYSAPPPPLQAASFSRGVVTMRCDISTCSSAHISLLVSGSAQACFNDQLLENHIKNEIIEKSQIVHAQLNNEVNKHIISEPRRSASIACGATIFEITMRLPQWALQILRQLAPDVSYRSLVALGIASIQGLPVASFEKDDAERLLFFYQSSEKDECANGNIVFSSPPIWLKPPLPTRKRCELSQGASHDIHDGVFAGQGAVNKVDGEEKDRKMVNGISTPLTPARQRLKVSAMRPIPHVRRHRMTPFCGPSEIDSFGGAHVEANVPLIPMKRSSVGTSSTAHRKSFSSSAHSKQVISLNPLPLKKHGCSRGPVQTCSEDEFIKDVMEFLILRGHSRLIPQGGLSEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMGNYTSTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSITNFKKKQHVANGYSQGSMSSRPL 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04110 786 Pfam ARID/BRIGHT DNA binding domain 603 700 IPR001606 GO:0003677
Vivi7g04110 786 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 704 766 IPR013083 -
Vivi7g04110 786 ProSiteProfiles ARID domain profile. 600 704 IPR001606 GO:0003677
Vivi7g04110 786 Gene3D - 597 703 IPR036431 GO:0003677
Vivi7g04110 786 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 783 IPR042293 -
Vivi7g04110 786 SUPERFAMILY FYVE/PHD zinc finger 703 772 IPR011011 -
Vivi7g04110 786 SMART ARID_2 597 700 - -
Vivi7g04110 786 SMART bright_3 601 705 IPR001606 GO:0003677
Vivi7g04110 786 SUPERFAMILY ARID-like 600 715 IPR036431 GO:0003677
Vivi7g04110 786 CDD PHD_ARID4_like 710 761 - -
Vivi7g04110 786 MobiDBLite consensus disorder prediction 215 231 - -
Vivi7g04110 786 MobiDBLite consensus disorder prediction 213 238 - -
Vivi7g04110 786 CDD ARID 602 700 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04110 4 775 ARID Transcription Factor Family AT3G43240 59.564 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Vivi7g04110 ARID 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04110 - - vvo:131616466 1582.39