Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04093 ATGGCCAAGCTTGCAAAACTAACAAAACTCAAATCAGCCATCAAAAGATGGCCTTCGCTAACCAAATTATCCCGCAACAGCAGCTCTGTGTCTTCCTCCTCCAACAAACATGAACAGGAGCAACAACTTCATGCTGTCTATGTCGGAAAGTCGCGGCGGCGGTATCTTGTGAACTCTGAAGTTGTTCAGCATCCGGTTTTTCAGGAGCTGGTGGATAGGTCTTGTTGTGAAGGTGGATGTGAGGATGGTGTTGTGGTTGTTTCTTGTGAGGTTGTTTTGTTTGAACATTTGTTGTGGATGCTTGAGAGTGGTGGAAATGAGACACAATTGGGTTCCATGGATGAACTTGTTGAATTCTACAATTGTGGTGCATGTTGA 378 0.4471 MAKLAKLTKLKSAIKRWPSLTKLSRNSSSVSSSSNKHEQEQQLHAVYVGKSRRRYLVNSEVVQHPVFQELVDRSCCEGGCEDGVVVVSCEVVLFEHLLWMLESGGNETQLGSMDELVEFYNCGAC 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04093 125 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Vivi7g04093 125 PANTHER EXPRESSED PROTEIN 13 121 - -
Vivi7g04093 125 MobiDBLite consensus disorder prediction 22 41 - -
Vivi7g04093 125 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04093 Vivi-Chr7 107579674 107580577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04093 3 101 Calmodulin-binding Proteins AT4G34750 27.723 3.29e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04093 - - vvo:131639316 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04093 7 107579674 107580577 Vivi7g04093 7 107579674 107580577 ECH