Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04090 ATGGGAGCTAGAGAAAGCAAGTTTATTAGGAAATGGGTTAGTGGTAGAAGTGTAAACAACAAAGGTCCTATGTTGTTGGTTCCAAAAGGTTATGTTCCAATATGTGTTGGAATGAATGAGGATACTTGTAGGATATTTATGGTTCATGTAAGAGCACTTAGTGATGCATTTTTTTGTGAGCTGTTGGGTAAGTCTGAGGAGGTGTATGGGTTAAGGAATGAAGGGGTTTTGAGGATTCCATTTGAAGCACAAGATTTTGAGGAGTTGTTCATTGGAAGGTCCAACAAAAAGATTAAAGTTAAGAGAATGGTTGATGGGCTTTGTTACTTGTAG 333 0.3784 MGARESKFIRKWVSGRSVNNKGPMLLVPKGYVPICVGMNEDTCRIFMVHVRALSDAFFCELLGKSEEVYGLRNEGVLRIPFEAQDFEELFIGRSNKKIKVKRMVDGLCYL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04090 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 89 IPR003676 GO:0009733
Vivi7g04090 110 Pfam Auxin responsive protein 27 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04090 Vivi-Chr7 107524973 107525409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04090 7 90 Calmodulin-binding Proteins AT4G34750 31.395 9.49e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04090 K14488 - gmx:102666083 125.176