Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04082 ATGGACGACGACGACGAGATCCACTCCAATCCATCGCCGTTGAGCGGATCTCCGGTGTCGTCACCTGGAGCAAAAGGTCGGATTTCGGTGACGGTTGCGGCCCCTGCGCCGCTACAAGAACATCCGGTGGTGAACAGCTATGCATTAGCGCTTCCGATTCAGAATCAGGCGGCGAGAGGAAGCAACGGTGGAGGGAGGGAGGATTGCTGGAGCGAAGGCGCGACGGCGGTGCTGATCGAGGCGTGGGGAGAGAGGTACCTTGAATTGAGCAGAGGGAATCTGAAGCAGAAGCATTGGAAGGAGGTGGCGGAGATCGTTAACGGGAGAGAGGATTATTTAAAGGCGCCGAAAACTGATATCCAGTGCAAGAACCGGATCGATACGGTCAAGAAGAAGTACAAATCGGAGAAAGCTAAGATCGCTGCCTCCGGCGGCGTTGTAGCTAGTAAATGGCCGTTTTATGACCGGTTAGAATACCTGATCGGTCCAACCGCCAAGGCCACCGGCGTCACAGGTGCTAGCACTTCTGGAAACAGTAATTTGCCACCGCAGAAAGTTCCGTTAGGAATTCCGGTGAATCTCCGGACCGCCGGTGCTGGGAATCAGTTTAATTCTCAAAAGAAAAATCAGAAACAACAGCCACAGCAACAGGCTCAGTTGAATTACCAGAAAGTTCAGCTCCGGCCGCGAGCTCCTGCGATAGATTCCGATAATTCGTCCGAACGAGAAGCGTTATCGCCAGTTTCGAGTGACAGTTTACCGCCGGAGAGTCACGAGAGGAAGAGGGTGAAAGTGAATCCAACTGGTGGAGAAGGGACAAGGAAAGGGAAAGGTTGGGGGAGTGCGGTGAGGGAATTGACTCAGGCGATTGTGAAATTCGGTGAAGCTTATGAACAAGCGGAGACATCGAAGTTGCAGCAGGTGGTGGAGATGGAGAAACAGAGGATGAAGTTTTCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACACAGATGGAGATTTCACAGCTCAAGCTTGGAAGAAGAAAAAGTGTTAATGGAAATGGTAATGGTAATGGTAACCCTAGCAATCATCATAAAAACATCAATGAAAACATCAACAACAACAACAACCATAACAATAATAGTGACACTGAATGA 1149 0.4987 MDDDDEIHSNPSPLSGSPVSSPGAKGRISVTVAAPAPLQEHPVVNSYALALPIQNQAARGSNGGGREDCWSEGATAVLIEAWGERYLELSRGNLKQKHWKEVAEIVNGREDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIAASGGVVASKWPFYDRLEYLIGPTAKATGVTGASTSGNSNLPPQKVPLGIPVNLRTAGAGNQFNSQKKNQKQQPQQQAQLNYQKVQLRPRAPAIDSDNSSEREALSPVSSDSLPPESHERKRVKVNPTGGEGTRKGKGWGSAVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFSKDLELQRMQFFMKTQMEISQLKLGRRKSVNGNGNGNGNPSNHHKNINENINNNNNHNNNSDTE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04082 382 FunFam trihelix transcription factor ASIL2 70 135 - -
Vivi7g04082 382 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 50 342 IPR044823 -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 345 382 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 254 268 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 169 188 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 10 24 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 169 183 - -
Vivi7g04082 382 Gene3D - 70 135 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 1 26 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 197 224 - -
Vivi7g04082 382 Pfam Myb/SANT-like DNA-binding domain 67 158 IPR044822 -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 239 253 - -
Vivi7g04082 382 MobiDBLite consensus disorder prediction 195 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04082 Vivi-Chr7 107430101 107431904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04082 1 362 Trihelix Transcription Factor Family AT3G14180 46.591 2.41e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi7g04082 Myb_DNA-bind_4 1.1e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04082 - - cam:101508093 465.692