Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04067 ATGACTGGTTTGCCTAATAGTTTGTCTGATGGCCGGAGAACAACCGCCGGTAAGGCGCCGGAGAGGTTAAAATTCTCTCAGACTTGTAGTATGTTGAGTCAATTCTTGAAGGAGAAGAGAATTTCTGGTGATTCTGCTTCTGGGATGTTTGGGAAAATTGACCCTAAAGGAGGTGCTAAGGATTTGTTTGGTAACATGAAAAACTCAGAAGGTGGTTTGAGATTAAATGCATCTGCTATGGATTCTCTTCCTCAGCTTGTGGAGAATCCTTGCATTAAGAAATCTAATACAAGTTCGACGACGGCTCCTAAGACGCCACAACTGACAATTTTCTACGCCGGGAAAATGCTAGTATTCGACGCTTTTGCACCCGCCAACGCAACCGAGATCATGGAATTGGCAACAAAGTTAGCCTCTGAAAATCCAAACACAGAAGAAAATCCACCCTCTGCACCTATCACAACTGAAAAATCAAAATCAAAGGAACCTCAAATTCCCCAACCAAACACTGCCTTAGAAACATCTAAACCAGAAAACCAAACCAATTCTACAGATATGAGATATCCAAGAAGAGCCTCACTTCTTAAATTTCTTGAAAAAAGAAAAGAAAGGGTTATTGCTAGAGGACCTTATCAAATTAACAATAACAAAAATGAGGGTAATAATAGTTCAGGAGGTGAACCTAAAGATCAACAACACTTTGACCTTAACTTATAG 717 0.4017 MTGLPNSLSDGRRTTAGKAPERLKFSQTCSMLSQFLKEKRISGDSASGMFGKIDPKGGAKDLFGNMKNSEGGLRLNASAMDSLPQLVENPCIKKSNTSSTTAPKTPQLTIFYAGKMLVFDAFAPANATEIMELATKLASENPNTEENPPSAPITTEKSKSKEPQIPQPNTALETSKPENQTNSTDMRYPRRASLLKFLEKRKERVIARGPYQINNNKNEGNNSSGGEPKDQQHFDLNL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04067 238 ProSiteProfiles Tify domain profile. 101 136 IPR010399 -
Vivi7g04067 238 MobiDBLite consensus disorder prediction 1 22 - -
Vivi7g04067 238 Pfam tify domain 103 134 IPR010399 -
Vivi7g04067 238 Pfam Jas motif 190 212 IPR018467 -
Vivi7g04067 238 MobiDBLite consensus disorder prediction 192 207 - -
Vivi7g04067 238 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 218 IPR040390 -
Vivi7g04067 238 MobiDBLite consensus disorder prediction 137 188 - -
Vivi7g04067 238 SMART tify_2 101 136 IPR010399 -
Vivi7g04067 238 MobiDBLite consensus disorder prediction 211 230 - -
Vivi7g04067 238 MobiDBLite consensus disorder prediction 137 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04067 Vivi-Chr7 107273809 107275986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04067 11 213 Tify Gene Family AT1G19180 33.624 1.06e-22 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vivi7g04067 tify 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04067 K13464 - gmx:100778559 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04067 7 107273809 107275986 Vivi7g04067 7 107273809 107275986 ECH