Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04063 ATGGCCATAGCTCCAACAATCCTCCATCCATCATTCTTCATCTTGATCTTCAATATCATCATCAAATTTTCCATTACAAGTTCCATGACAGAAGCAGAAGCATTATTGAGTCTAAAAAACTCTTTCACCAATTCTGTTGCTCTTAATAATTGGATTGCCAACACTTTGCCTTGCGCCGAAGACGAACAATGGGAAGGCGTAATATGTTACAACGGGTTAGTAACCGGTCTTCGCCTCGGTGGAATGGGACTATTCGGAAAAATTGATGTTGATGCATTGCTTGAACTCAGAGGTCTAAGAACTATTAGTCTTAATGATAATTCTTTCGAAGGTTCGATACCAGAATTGAATCGAATCGGTTACCTAAAAGCGATATATTTGTCGAGAAACAAATTCTCAGGACATATTCCTAAGGAATATTTTCTAAGAATGAATTCATTGAAGAAAGTTTATTTATCTGATAATGAATTCACAGGTGAGGTTCCTTTATCATTGGCCGAGGTTCCTTCACTCGTCGAATTACATCTTGAAAATAATCAGTTTAGCGGTACCATTCCGAATTTGAATAATCCTGCATTGGTGATATTTAATGCTTCAAACAATAATTTGGAAGGTGAAGTTCCAGAAAGTTTGTTGAGATTCAATGAGAGTTCTTTCTTAGGTAATGCTGGTTTATGCGGCGAGAAATTCGGTACAATATGTGGACAAACAACGATGCAGAAAAAACCAAAACCAAAACCTGTTAATGCACAAGATATTAATAATATTACACAACTCAACAACACTAATAGCAATCATGTTTATGTGAGTGTGCCAGATCAGAGTAAGCATAGATCATTGCAGATTATTGGTATTGTTGTGACATGTGCAGCACTAATTGCACTGGCTATATTTTTGATTGTGAGAGCAAGAAAAAAGAAAGAGAAGGACAAATCGAGCGAAATCGGCGAGAAAAATGGACAGGAAAGTGTGAATGATTGTGGTGGAAGTTTTGAGGTTCAAGTGAGTAGTAATAGTATTTGTAGTAATGATATTAGTAATAGTCATGTGAAAAGAGATACAGGTTCGATGAAAAAAGCATCATCTAGTAGTAGAAGGAGTTCATCACATGGAAGTAGAGGGATAGGTGAGCTTGTGATGATGAATGAGGAGAAGGGTGTGTTTGGTATGCCTGATTTGATGAAAGCTTCTGCTGAGGTTCTTGGAAATGGAGGGTTTGGATCTTCTTATAAAGCTGTTATGTCTAATGGTGTTGCTGTGGTTGTGAAAAGGACTAGAGAGTTGAATTCTTTGGGAAAAGATGGTTTTGAAGCTGAGATGAAAATTCTATCAAGGTTACACCATTGGAATCTTTTGACACCTTTGGCTTATCATTATAGAAAAGATGAGAAGTTGGTTATCTCTGAGTATGTTCCTAGAGGAAGTCTACTCTATTTGCTGCATGGTGATAAAGGACCATCTCATACAGAACTAGATTGGAACACACGTTTAAAAATTGTACAAGGAATTGCAAAAGGAATGCAATATCTTCATACAAAACTCTCTTCTTGTGATCTACCACATGGAAATCTCAAATCAAGCAATGTTCTACTTGGACCAGATTATGAACCATTACTTATGGACTATGGTTTCATCCATCTAGTAAACCCTTCAAATTTTGCAAACACATTATTTGCTTATAGAGCACCAGAAGCCTCACAACACAATCAAATTTCGCCTCGTTGTGACGTATACTGTCTCGGCGTAGTCATACTCGAAATAATCACTGGAAAATATCCTTCACAATATCTTAGCAATGGTAAAGGCGGAACCGATCTAGTACAATGGGTGGCATCAGCGGTTTCCGAAGGAAGGGAGTTTGAACTACTTGATCCTGAAATCGCGAGTAAAAGAAATTCGTTAGACGATATAAAACAACTTGTTTACATTGGTGCAGCGTGTACCGAAAGTAATCCTCAAAAGAGATTAGATATGATGGAAGCAACTAGAAGAATAGAAGAGATTAAAGCAAGTGAGGTTGATCATGTTCAAGAAGCAAGAACAATAGAGGTCTTGCCTTCTTTTGAAGATGATGAATATGGAGATTCTTTTCAAGGGTATGATGATAATGAAGAACCAAGGAGGAAACATGGAACAGATACTTTTGGAAGTAAAGATACTTTTGACTTAGGTGTTTCCTAA 2181 0.3714 MAIAPTILHPSFFILIFNIIIKFSITSSMTEAEALLSLKNSFTNSVALNNWIANTLPCAEDEQWEGVICYNGLVTGLRLGGMGLFGKIDVDALLELRGLRTISLNDNSFEGSIPELNRIGYLKAIYLSRNKFSGHIPKEYFLRMNSLKKVYLSDNEFTGEVPLSLAEVPSLVELHLENNQFSGTIPNLNNPALVIFNASNNNLEGEVPESLLRFNESSFLGNAGLCGEKFGTICGQTTMQKKPKPKPVNAQDINNITQLNNTNSNHVYVSVPDQSKHRSLQIIGIVVTCAALIALAIFLIVRARKKKEKDKSSEIGEKNGQESVNDCGGSFEVQVSSNSICSNDISNSHVKRDTGSMKKASSSSRRSSSHGSRGIGELVMMNEEKGVFGMPDLMKASAEVLGNGGFGSSYKAVMSNGVAVVVKRTRELNSLGKDGFEAEMKILSRLHHWNLLTPLAYHYRKDEKLVISEYVPRGSLLYLLHGDKGPSHTELDWNTRLKIVQGIAKGMQYLHTKLSSCDLPHGNLKSSNVLLGPDYEPLLMDYGFIHLVNPSNFANTLFAYRAPEASQHNQISPRCDVYCLGVVILEIITGKYPSQYLSNGKGGTDLVQWVASAVSEGREFELLDPEIASKRNSLDDIKQLVYIGAACTESNPQKRLDMMEATRRIEEIKASEVDHVQEARTIEVLPSFEDDEYGDSFQGYDDNEEPRRKHGTDTFGSKDTFDLGVS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04063 726 Gene3D Ribonuclease Inhibitor 142 380 IPR032675 -
Vivi7g04063 726 Gene3D Phosphorylase Kinase; domain 1 394 470 - -
Vivi7g04063 726 SUPERFAMILY L domain-like 29 214 - -
Vivi7g04063 726 Pfam Protein kinase domain 399 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04063 726 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 671 IPR046959 -
Vivi7g04063 726 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Vivi7g04063 726 SUPERFAMILY Protein kinase-like (PK-like) 399 665 IPR011009 -
Vivi7g04063 726 ProSiteProfiles Protein kinase domain profile. 395 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04063 726 MobiDBLite consensus disorder prediction 685 726 - -
Vivi7g04063 726 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Vivi7g04063 726 Gene3D Transferase(Phosphotransferase) domain 1 471 687 - -
Vivi7g04063 726 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Vivi7g04063 726 MobiDBLite consensus disorder prediction 344 375 - -
Vivi7g04063 726 MobiDBLite consensus disorder prediction 309 328 - -
Vivi7g04063 726 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 90 185 - -
Vivi7g04063 726 MobiDBLite consensus disorder prediction 700 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04063 Vivi-Chr7 107174460 107177639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04063 19 668 Receptor kinase-like Gene Family AT3G42880 42.537 7.03e-178 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g04063 Pkinase 3.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04063 - - tpra:123886727 998.038