Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04054 ATGACAGCAAATAAAAACCTAAGTATATTGCAGACTGAGGATTTGACCAAGTATATACTTGAAACGAGTGTTTATCCACGAGAAGCAGAAACTCTCAAAGATATAAGGAATGCCAATGCAAGCTACCCTATGGGCTTCATGAGCACTCCACCTGATGCGGGTCAACTAATGGCCATACTCCTTAAATTGTTGAATGCTAAAAAGACAATTGAAGTCGGAGTTTTTACCGGATACTCTCTTCTCCTCACCGCACTTTCCATTCCTGATGATGGAAAGATTATAGCGGTGGATCCAGACCGAAAAGCTTATGAAGTAGGGCTTCCGTTCATTAAAAAGGCCGGTGTTGAACACAAGATTGATTACATAGAGTCTGAAGCTTTACCGGTTCTTGATAAACTCTTAGAAAATCCTTCAAATGATGGAAATTTTGACTTTGCTTTTGTGGATGCTGACAAACACAATTACTGGAATTATCATGAGAGGCTTCTTAAACTAATTAAGATTGGTGGATTAATCATCTATGATAACACTCTTTGGGGTGGAACTGTTGCATTGCCTGAAGAAGATGTTTTAGGTCACAAGAGAAAAATAAGACTAGATGCACTTGCTTTCAATGAAGCTATTGCAAGTGACACTCGTGTTGAGATTTGTCTTGCTTCAATTGGTGATGGTTTCACTATCGCTAGGCGTGCTCATTGA 699 0.3934 MTANKNLSILQTEDLTKYILETSVYPREAETLKDIRNANASYPMGFMSTPPDAGQLMAILLKLLNAKKTIEVGVFTGYSLLLTALSIPDDGKIIAVDPDRKAYEVGLPFIKKAGVEHKIDYIESEALPVLDKLLENPSNDGNFDFAFVDADKHNYWNYHERLLKLIKIGGLIIYDNTLWGGTVALPEEDVLGHKRKIRLDALAFNEAIASDTRVEICLASIGDGFTIARRAH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04054 232 PANTHER O-METHYLTRANSFERASE-RELATED 4 231 - -
Vivi7g04054 232 Gene3D Vaccinia Virus protein VP39 1 231 IPR029063 -
Vivi7g04054 232 CDD AdoMet_MTases 70 174 - -
Vivi7g04054 232 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 8 231 IPR002935 GO:0008171
Vivi7g04054 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 230 IPR029063 -
Vivi7g04054 232 Pfam O-methyltransferase 21 230 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04054 Vivi-Chr7 107017740 107019297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04054 1 232 Monolignol Biosynthesis Gene Families AT4G26220 60.345 1.02e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04054 K00588 - gmx:100780516 364.77