Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04051 ATGTCTGCGACAATGATAAGTGATCCAATGATGATAACAGCTTCAGCACCAGAAACTCAATCAGCAGCTAGTAGCAATCTAGTTGTTGCACAGAATGAAGTTGAATTTGCAATATGTGAATGCTGTGGCCTAACGGAAGAGTGCACGCCAGCATACATAGAACGAATCAGAGAAAGATATCAAGGAAAATGGGTTTGTGGATTGTGCGGTGAAGCTGTTAAAGATGAAATTGTGAGGTCAGAGAGGCTTGTAAGCACAGAAGAAGCAATGGCAACACATATGAACTTTTGCAAGAAATTCAATACTTCAGGTCCTCCTCCAAATCCTGCCGTTCATTTGATTTCAGCTATGAGACAGATTCTTAGGAGGAGTTTGGTTAGGTCCACACCAAATAGTCCGGTTAATAAGAGTAGTCGAGAAATTCATGTCTCTGGACTCGCTAGGTCGGAAAGCTGCTTCTCTACTCTATCCGGTTCCTAA 480 0.4229 MSATMISDPMMITASAPETQSAASSNLVVAQNEVEFAICECCGLTEECTPAYIERIRERYQGKWVCGLCGEAVKDEIVRSERLVSTEEAMATHMNFCKKFNTSGPPPNPAVHLISAMRQILRRSLVRSTPNSPVNKSSREIHVSGLARSESCFSTLSGS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04051 159 PANTHER OS01G0745000 PROTEIN 23 157 IPR012876 -
Vivi7g04051 159 Pfam Protein of unknown function (DUF1677) 34 123 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04051 Vivi-Chr7 106988326 106990103 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04051 - - vvo:131618200 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01551 3 25510676 25511334 Vivi7g04051 7 106988326 106990103 ECH
Vivi7g04051 7 106988326 106990103 Vivi7g04051 7 106988326 106990103 ECH
Vivi7g04051 7 106988326 106990103 Vivi3g01549 3 25497418 25498292 ECH