Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04027 ATGATTATGGAACCAAACCCGACTTCAGATCACATTCTTGACTGGCTTGAAGGTTCGGTTTCGTTCTTTCCGTCGTTCTTGGATGATCCGTATAACAGCGGTTACATCCAAGAGTATCCGTTATGGGATCAGAGTCAAGATATAAGGAGCCAGTATCAAACTGATGTGATTATTGATTCTTCTAATGCAACAAACAGCGCGAACAATGTTGCTGCTGCTAGTACTACTACCACGAGCGCGACTTCCCTTGAGCCTAATAGTTCGAATAATGTAACTTTTTCTGATTTACCGAAGAAACGAAATGTTGATGATGAGTCAAGTCTCGAGAAACAATCACGAAGCCAGAAGAACAAGAGAGTCAAGAGGCGTGTGATGAATGAAGGTGATAATGGAGATGCGGGTCTTGAAGGGACAGTGGTTAGAAAATCTGGTGGGAATAAGAAAGGTGCTGCTAAGGCTAATGGAAGTAACTGTAACAATGGAAACAATAAGGATGGTAGATGGGCTGAGCAGTTGCTGAACCCTTGTGCTGCAGCAATAACCGGAGGAAACCTGAATCGCGTGCAACATCTTTTATATGTTCTCCATGAGCTAGCTTCACCTACCGGTGATGCTAACCACCGGCTTGCAGCGCATGGTCTCCGAGCGTTGACACACCATCTGTCTTCATCTTCGTCGTCTACCTCTTCAGGGACTATAACTTTTGCATCTACCGAGCCGCGATTCTTCCAAAAGTCGTTACTGAAGTTCTATGAGGTTAGTCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTTCAAGTTCTAGCTGAAGAGCCGAATGATTCGCGCGCTCTTCATATCCTCGACATTGGAGTCTCTCATGGTGTGCAATGGCCGACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCTCTGGTTCGCCTCACTGTGGTTACTGCTTCATCGACTGAAAACGACCAAAACATGGAGACACCATTTTCAATAGGTCCATGTGGTGATAACTTCTCTTCGAGACTTCTAGGTTATGCTAAGTCCATAAATGTCAACCTGCAGATAAACAAGCTTGATAATATTCCATTGCAGACATTAACGGCTAAAATTGTTGACGCCACACCTGATGAGACCTTAATCGTCTGCGCTCAATTCAGGTTGCACCACTTGAATCATAACAATCCTGATGAAAGAAGTGAGTTTCTGAAAGTGTTGAGAGACATGAAGCCTAAAGGGGTGATATTGAATGAGAACAACATGGAGTGTTGCTGCAGTAGCTGTGGCGATTTCGCGGCTAGATTCTCTCGACGAGTGGACTACTTATGGAAGTTCTTAGATTCAATCAGTTCAGCATTCAAAGGCCGCGAGAATGATGAAAGGAGAATGATGGAAGGCGAGGCTTCGAAAGCATTGACAAACCAGCGTGAGATGAACGAAATGAGAGAAAAATGGTGTGAAAGAATGAAAGAGGTAGGGTTTGCAGAGGAAATATTTGGAGAGGATGCGATTGACGGAGGTCGAGCTTTGTTAAGAAAGTATGATAGTAATTGGGAGATGAAACTCGAAGAAGAGAACAATACAAGTGTGGGACTATGGTGGAAGGGGCAACCTGTTTCTTTCTGTTCTCTGTGGAAATTGGATAAACAACATTGA 1665 0.4414 MIMEPNPTSDHILDWLEGSVSFFPSFLDDPYNSGYIQEYPLWDQSQDIRSQYQTDVIIDSSNATNSANNVAAASTTTTSATSLEPNSSNNVTFSDLPKKRNVDDESSLEKQSRSQKNKRVKRRVMNEGDNGDAGLEGTVVRKSGGNKKGAAKANGSNCNNGNNKDGRWAEQLLNPCAAAITGGNLNRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHLSSSSSSTSSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNDSRALHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDQNMETPFSIGPCGDNFSSRLLGYAKSINVNLQINKLDNIPLQTLTAKIVDATPDETLIVCAQFRLHHLNHNNPDERSEFLKVLRDMKPKGVILNENNMECCCSSCGDFAARFSRRVDYLWKFLDSISSAFKGRENDERRMMEGEASKALTNQREMNEMREKWCERMKEVGFAEEIFGEDAIDGGRALLRKYDSNWEMKLEEENNTSVGLWWKGQPVSFCSLWKLDKQH 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04027 554 ProSiteProfiles GRAS family profile. 160 549 IPR005202 -
Vivi7g04027 554 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 123 537 IPR005202 -
Vivi7g04027 554 Pfam GRAS domain family 170 549 IPR005202 -
Vivi7g04027 554 MobiDBLite consensus disorder prediction 76 96 - -
Vivi7g04027 554 MobiDBLite consensus disorder prediction 97 114 - -
Vivi7g04027 554 MobiDBLite consensus disorder prediction 76 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04027 Vivi-Chr7 106509331 106511299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04027 1 549 GRAS Transcription Factor Family AT3G13840 50.000 1.85e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi7g04027 GRAS 1.7e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04027 - - mtr:11434050 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04027 7 106509331 106511299 Vivi7g04027 7 106509331 106511299 ECH