Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03999 ATGAAGTTAAACCAAGTGGACCAAGGTAAATCAAAAGGACTTGTAGGAATTGAAAAACAGATTTCACCTATAGAATCATTGTTACATTTAGAGTCGGAAGATGTTCGTGTTCTTGGAATTTGGGGTATGCCTGGTATTGGTAAAACAACTATTGCTGAAGAAGTATTTCGCAGGCTACGCTCCGAATACGAAAGTTTTTGTTTTATGGCTAATGTAAGAGAAGAATCGGAAAGATACGGTACAAACAGTTTGAGGTTAAGAAAGAAGCTTTTATCCACTTTACTAGAGGAAGAAGATTTGAAAGATGACATGATAAATGGATTACCTTCTTTAGTTAAGAAAAGGCTTGGCCGCATGAAGGTTCTTATTGTTCTTGACGATGTCAAAGATGCGGAGCAACTAGAAGTTTTGGTTGGAACAGCTGATTGGTTAGGTGCAGGGAGTAGAATCATCATAACTACTAGAGATAAGCAAGTACTTGCTGGAAAAGTTGATGATATATACGAGGTTGAGCCATTGGACTCTGCTGAATCTTTTCAGCTTTTCAATTTGCATGCCTTTAACAAACAAAAGCATCTTGAAATGGAGTACTATAAGCTATCAATGAAGATGGTAGATTATACCAAAGGTGTTCCATTAGTTCTTAAAGCTTTAGCTAACCTTCTTTGTGAGAAAGATAAAGCCATATGGGAAAGCCAAGCAAGGAATCTGAAAATAGAGCTGATTGAAAATGTCCATGATGTTTTTAGATTGATATACACTAATCTTGATTATTATGAAAAGATTATATTCCTGGATATTGCCTGCTTTTTTGATGGATTGAAGTTGAAACTTGACCTCATACAACTTCTATGGAAAGACCGTCGATATTCGGTGAGCACTAAACTAGACAGACTTAAAGATAAAGCTCTTGTAACAATTTCCCAACAAAATATTGTATCAATGCATGACATTATACAAGAAACAGCTTGGGAGATTGTTCGACAAGAATCTGTTGAAGAACCTGGAAGCCGAAGCCGACTATTGGATCCTGATGATATTTATCATGTATTGAAACGTGACAAGGGAAGTGAGGCCATCAGAAGTATGGCCATCAGATTATCTGAAATTAAGGAGCTGCAGTTAAGCCCTCGAGTATTTGCCAAGATGAGCAAATTGAAATTTTTGGATATTTACACTAATGGATCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGGCTTGAATTCTTGCCTAATGAACTGAGATATCTCCGTTGGGAGTATTACCCTTTGGAATCCTTGCCATCCAATTTTTCTGCAGAAAACCTTGTTACATTAAACTTGCCTTATAGCCAACTGAAGAAACTTTGGCATGGAGTGAAGGATCTTGGGAATTTGAATGTCCTTGTACTCCATTCATCCACACTCCTAACAGAGCTACCAGATTTTTCAAAGGCCACGAGTCTTGCGGTAATGGACCTCCATTTCTGCATAGGGTTGACTAGTGTTCATCCATCTGTTTTCTCTCTAAAAAAGCTTAAGAAACTGGATATGAGTGGATGCATTTCCCTTACAAGTCTTCAAAGCAATAATACTCATTTAAGTTCACTTAGTTATCTCTCCCTCTACAACTGCACAGCGCTGAAGGAGTTTTCAGTGACCTCAGAGAACATGAAAGAATTGAATTTAGAACTCACGGATATCAAGGAACTACCCTCGTCAATTGGACTTCAAACCAAACTCGAAAAGTTGCATCTTGGACATACTCATATTGAGACCTTGCCTAAAAGCATCAAGAATCTTACAAGACTGAGACATCTAGACTTGCATCAATGCAAGGAGCTTCAAACTCTACCAGAGCTTCCTCAATCGCTAGAAACACTAAATGCCGATGGGTGTGTATCACTAGAGAATGTAGTGTTCCACTCAACTGCTAGTGAACAACTTAAAGAAAAGAAGAAAAAGGTTACCTTCTGGAATTGCCTTAAATTAAACGAGCCTTCTCTCAAGGCTATTGAGTTGAATGCTCAAATTAACATGATGAACTTTTCACACCATTGTATATCCACACGTGATCTTGATCGTGATCACGATCACGATCGCAGTCAAGGGATGTATGTCTATCCAGGTAGAGAAATTCCAGAGTGGTTGGAATATAGAACAACTACAACTACACGTGACTACCTAACTATTGATCTTTCTTCTGCTCCTTATTTCTCCAACTTGGGCATCATTTTTGGATTCATCATTCCAACAACAACATCAGAGGGTTCAATTCTGAAATTCAAAATCAGCGATGGTGAAGATGAAGGTATCAAAGTGTACTTGGACAGACCACGTGATGGAATTGAATCGGATCATGTGTATCTAATGTATGACCCAAGATGTTCTCATTACCTAGCTAGCCGAGTGAATGATCAGTCGAAGATTAAAATCCAGGTTAGAGCGGCATCAAGAACACCGACAACACAGTACGTGCCAGTGCAGTTAAGAGGGTTTGGGGTTAGCCTAGTAACCCCTTCACAATATGACAAGTTTAAACAGCAATTGGAATTTGGTGATGGTACTCCAAATAACATGTGTTCGATGGAAGAGGAATCAAAGTTTCTTGGAATTGAAAATGCTAAACAGTTGAGTTATTTCAATTGCATGATTTAG 2640 0.3841 MKLNQVDQGKSKGLVGIEKQISPIESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYESFCFMANVREESERYGTNSLRLRKKLLSTLLEEEDLKDDMINGLPSLVKKRLGRMKVLIVLDDVKDAEQLEVLVGTADWLGAGSRIIITTRDKQVLAGKVDDIYEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSMKMVDYTKGVPLVLKALANLLCEKDKAIWESQARNLKIELIENVHDVFRLIYTNLDYYEKIIFLDIACFFDGLKLKLDLIQLLWKDRRYSVSTKLDRLKDKALVTISQQNIVSMHDIIQETAWEIVRQESVEEPGSRSRLLDPDDIYHVLKRDKGSEAIRSMAIRLSEIKELQLSPRVFAKMSKLKFLDIYTNGSQNEGSLSLPQGLEFLPNELRYLRWEYYPLESLPSNFSAENLVTLNLPYSQLKKLWHGVKDLGNLNVLVLHSSTLLTELPDFSKATSLAVMDLHFCIGLTSVHPSVFSLKKLKKLDMSGCISLTSLQSNNTHLSSLSYLSLYNCTALKEFSVTSENMKELNLELTDIKELPSSIGLQTKLEKLHLGHTHIETLPKSIKNLTRLRHLDLHQCKELQTLPELPQSLETLNADGCVSLENVVFHSTASEQLKEKKKKVTFWNCLKLNEPSLKAIELNAQINMMNFSHHCISTRDLDRDHDHDRSQGMYVYPGREIPEWLEYRTTTTTRDYLTIDLSSAPYFSNLGIIFGFIIPTTTSEGSILKFKISDGEDEGIKVYLDRPRDGIESDHVYLMYDPRCSHYLASRVNDQSKIKIQVRAASRTPTTQYVPVQLRGFGVSLVTPSQYDKFKQQLEFGDGTPNNMCSMEEESKFLGIENAKQLSYFNCMI 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03999 879 Pfam NB-ARC domain 31 243 IPR002182 GO:0043531
Vivi7g03999 879 Gene3D Ribonuclease Inhibitor 353 550 IPR032675 -
Vivi7g03999 879 Gene3D Ribonuclease Inhibitor 551 678 IPR032675 -
Vivi7g03999 879 FunFam Disease resistance protein RPS4 357 550 - -
Vivi7g03999 879 PRINTS Disease resistance protein signature 37 52 - -
Vivi7g03999 879 PRINTS Disease resistance protein signature 115 129 - -
Vivi7g03999 879 PRINTS Disease resistance protein signature 502 518 - -
Vivi7g03999 879 PRINTS Disease resistance protein signature 208 222 - -
Vivi7g03999 879 Gene3D - 3 167 IPR027417 -
Vivi7g03999 879 SUPERFAMILY "Winged helix" DNA-binding domain 245 352 IPR036390 -
Vivi7g03999 879 SUPERFAMILY L domain-like 365 658 - -
Vivi7g03999 879 Gene3D - 173 257 IPR042197 -
Vivi7g03999 879 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 546 IPR044974 GO:0006952
Vivi7g03999 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 267 IPR027417 -
Vivi7g03999 879 Pfam Leucine Rich Repeat 436 455 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03999 Vivi-Chr7 106065694 106073177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03999 14 622 WRKY Transcription Factor Family AT4G12020 39.516 5.55e-114 381