Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03998 ATGGTCACAAGATATCAACATACATTCTCGATCAAACAAAAGCTCTTTCCTTCTTTCTTCTTTTTCAGATATCTCGTGGTTAGAATGAACAAGTATGAATCCAATAGAAGCATAAGTTTATTATTTCTTTATCTCATCACCCTCTTGCTTATTTCAAAACCAAAGGCTATAGTTGCAAACATAATTCCAGCTTCAAACAACCACTATTATTCTACATGTCCTGTCACATATTCTCCTTCAACTTCCACACCTGCACCACAGATAAAATACGATGTCTTTGTTAGCTTCAAAGGTAGCGATGTTCGCAAAAACTTCCTTAGTCATGTCCTCGAGGCTTTGTCGCGAAAGAAAATCATTGTCTTTTCCGACAAGAAGCTCAAAACAGGAGATGAGTTATCAGCAATACAAAGAGCAATTGAAAACTCATTCATTTCATTGGTTATATTCTCCCAAAACTTTGCATCTTCATATTGGTGTTTGGAGGAAGTTCTGAAAATAGTTGAGTGTAGAGAAAAATATGGAAGGATTCTAATGCCAGTGTTCTACCAAGTTGAGCCTTCAGTTGTAAGGCATCAAAATGGGAGTTATAAAGATGCTTTTGCTCAACATGAAAAAAGGTATGATCCACACAAGGTGCTAAGCTGGAGATCTGCTTTGAAGCAATCTGCCAATATTTCTGGATTTGATTCATCATTTTTTTCGGATGATGCTAAGCTTGTTGAAGAAATACTTCAAAGTGTGTTGATGAAGTTAAACCAAGTGGACCAAGGTAAATCAAAAGGACTTGTAGGAATTGAAAAACAGATTTCACCTATAGAATCATTGTTACATTTAGAGTCGGAAGATGTTCGTGTTCTTGGAATTTGGGGTATGCCTGGTATTGGTAAAACAACTATTGCTGAAGAAGTATTTCGCAGGCTACGCTCCGAATACGAAAGTTTTTGTTTTATGGCTAATGTAAGAGAAGAATCGGAAAGATACGGTACAAACAGTTTGAGGTTAAGAAAGAAGCTTTTATCCACTTTACTAGAGGAAGAAGATTTGAAAGATGACATGATAAATGGATTACCTTCTTTAGTTAAGAAAAGGCTTGGCCGCATGAAGGTTCTTATTGTTCTTGACGATGTCAAAGATGCGGAGCAACTAGAAGTTTTGGTTGGAACAGCTGATTGGTTAGGTGCAGGGAGTAGAATCATCATAACTACTAGAGATAAGCAAGTACTTGCTGGAAAAGTTGATGATATATACGAGGTTGAGCCATTGGACTCTGCTGAATCTTTTCAGCTTTTCAATTTGCATGCCTTTAACAAACAAAAGCATCTTGAAATGGAGTACTATAAGCTATCAATGAAGATGGTAGATTATACCAAAGGTGTTCCATTAGTTCTTAAAGCTTTAGCTAACCTTCTTTGTGAGAAAGATAAAGCCATATGGGAAAGCCAAGCAAGGAATCTGAAAATAGAGCTGATTGAAAATGTCCATGATGTTTTTAGATTGATATACACTAATCTTGATTATTATGAAAAGATTATATTCCTGGATATTGCCTGCTTTTTTGATGGATTGAAGTTGAAACTTGACCTCATACAACTTCTATGGAAAGACCGTCGATATTCGGTGAGCACTAAACTAGACAGACTTAAAGATAAAGCTCTTGTAACAATTTCCCAACAAAATATTGTATCAATGCATGACATTATACAAGAAACAGCTTGGGAGATTGTTCGACAAGAATCTGTTGAAGAACCTGGAAGCCGAAGCCGACTATTGGATCCTGATGATATTTATCATGTATTGAAACGTGACAAGGGAAGTGAGGCCATCAGAAGTATGGCCATCAGATTATCTGAAATTAAGGAGCTGCAGTTAAGCCCTCGAGTATTTGCCAAGATGAGCAAATTGAAATTTTTGGATATTTACACTAATGGATCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGGCTTGAATTCTTGCCTAATGAACTGAGATATCTCCGTTGGGAGTATTACCCTTTGGAATCCTTGCCATCCAATTTTTCTGCAGAAAACCTTGTTACATTAAACTTGCCTTATAGCCAACTGAAGAAACTTTGGCATGGAGTGAAGGATCTTGGGAATTTGAATGTCCTTGTACTCCATTCATCCACACTCCTAACAGAGCTACCAGATTTTTCAAAGGCCACGAGTCTTGCGGTAATGGACCTCCATTTCTGCATAGGGTTGACTAGTGTTCATCCATCTGTTTTCTCTCTAAAAAAGCTTAAGAAACTGGATATGAGTGGATGCATTTCCCTTACAAGTCTTCAAAGCAATAATACTCATTTAAGTTCACTTAGTTATCTCTCCCTCTACAACTGCACAGCGCTGAAGGAGTTTTCAGTGACCTCAGAGAACATGAAAGAATTGAATTTAGAACTCACGGATATCAAGGAACTACCCTCGTCAATTGGACTTCAAACCAAACTCGAAAAGTTGCATCTTGGACATACTCATATTGAGACCTTGCCTAAAAGCATCAAGAATCTTACAAGACTGAGACATCTAGACTTGCATCAATGCAAGGAGCTTCAAACTCTACCAGAGCTTCCTCAATCGCTAGAAACACTAAATGCCGATGGGTGTGTATCACTAGAGAATGTAGTGTTCCACTCAACTGCTAGTGAACAACTTAAAGAAAAGAAGAAAAAGGTTACCTTCTGGAATTGCCTTAAATTAAACGAGCCTTCTCTCAAGGCTATTGAGTTGAATGCTCAAATTAACATGATGAACTTTTCACACCATTGTATATCCACACGTGATCTTGATCGTGATCACGATCACGATCGCAGTCAAGGGATGTATGTCTATCCAGGTAGAGAAATTCCAGAGTGGTTGGAATATAGAACAACTACAACTACACGTGACTACCTAACTATTGATCTTTCTTCTGCTCCTTATTTCTCCAACTTGGGCATCATTTTTGGATTCATCATTCCAACAACAACATCAGAGGGTTCAATTCTGAAATTCAAAATCAGCGATGGTGAAGATGAAGGTATCAAAGTGTACTTGGACAGACCACGTGATGGAATTGAATCGGATCATGTGTATCTAATGTATGACCCAAGATGTTCTCATTACCTAGCTAGCCGAGTGAATGATCAGTCGAAGATTAAAATCCAGGTTAGAGCGGCATCAAGAACACCGACAACACAGTACGTGCCAGTGCAGTTAAGAGGGTTTGGGGTTAGCCTAGTAACCCCTTCACAATATGACAAGTTTAAACAGCAATTGGAATTTGGTGATGGTACTCCAAATAACATGTGTTCGATGGAAGAGGAATCAAAGTTTCTTGGAATTGAAAATGCTAAACAGTTGAGTTATTTCAATTGCATGATTTAG 3384 0.3794 MVTRYQHTFSIKQKLFPSFFFFRYLVVRMNKYESNRSISLLFLYLITLLLISKPKAIVANIIPASNNHYYSTCPVTYSPSTSTPAPQIKYDVFVSFKGSDVRKNFLSHVLEALSRKKIIVFSDKKLKTGDELSAIQRAIENSFISLVIFSQNFASSYWCLEEVLKIVECREKYGRILMPVFYQVEPSVVRHQNGSYKDAFAQHEKRYDPHKVLSWRSALKQSANISGFDSSFFSDDAKLVEEILQSVLMKLNQVDQGKSKGLVGIEKQISPIESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYESFCFMANVREESERYGTNSLRLRKKLLSTLLEEEDLKDDMINGLPSLVKKRLGRMKVLIVLDDVKDAEQLEVLVGTADWLGAGSRIIITTRDKQVLAGKVDDIYEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSMKMVDYTKGVPLVLKALANLLCEKDKAIWESQARNLKIELIENVHDVFRLIYTNLDYYEKIIFLDIACFFDGLKLKLDLIQLLWKDRRYSVSTKLDRLKDKALVTISQQNIVSMHDIIQETAWEIVRQESVEEPGSRSRLLDPDDIYHVLKRDKGSEAIRSMAIRLSEIKELQLSPRVFAKMSKLKFLDIYTNGSQNEGSLSLPQGLEFLPNELRYLRWEYYPLESLPSNFSAENLVTLNLPYSQLKKLWHGVKDLGNLNVLVLHSSTLLTELPDFSKATSLAVMDLHFCIGLTSVHPSVFSLKKLKKLDMSGCISLTSLQSNNTHLSSLSYLSLYNCTALKEFSVTSENMKELNLELTDIKELPSSIGLQTKLEKLHLGHTHIETLPKSIKNLTRLRHLDLHQCKELQTLPELPQSLETLNADGCVSLENVVFHSTASEQLKEKKKKVTFWNCLKLNEPSLKAIELNAQINMMNFSHHCISTRDLDRDHDHDRSQGMYVYPGREIPEWLEYRTTTTTRDYLTIDLSSAPYFSNLGIIFGFIIPTTTSEGSILKFKISDGEDEGIKVYLDRPRDGIESDHVYLMYDPRCSHYLASRVNDQSKIKIQVRAASRTPTTQYVPVQLRGFGVSLVTPSQYDKFKQQLEFGDGTPNNMCSMEEESKFLGIENAKQLSYFNCMI 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03998 1127 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 90 879 IPR044974 GO:0006952
Vivi7g03998 1127 Gene3D - 87 249 IPR035897 -
Vivi7g03998 1127 SMART till_3 89 225 IPR000157 GO:0007165
Vivi7g03998 1127 SUPERFAMILY L domain-like 613 906 - -
Vivi7g03998 1127 Pfam NB-ARC domain 279 491 IPR002182 GO:0043531
Vivi7g03998 1127 SUPERFAMILY "Winged helix" DNA-binding domain 493 600 IPR036390 -
Vivi7g03998 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 259 515 IPR027417 -
Vivi7g03998 1127 PRINTS Disease resistance protein signature 750 766 - -
Vivi7g03998 1127 PRINTS Disease resistance protein signature 285 300 - -
Vivi7g03998 1127 PRINTS Disease resistance protein signature 456 470 - -
Vivi7g03998 1127 PRINTS Disease resistance protein signature 363 377 - -
Vivi7g03998 1127 Pfam TIR domain 89 262 IPR000157 GO:0007165
Vivi7g03998 1127 FunFam Disease resistance protein RPS4 605 798 - -
Vivi7g03998 1127 SUPERFAMILY Toll/Interleukin receptor TIR domain 81 228 IPR035897 -
Vivi7g03998 1127 Gene3D - 250 414 IPR027417 -
Vivi7g03998 1127 Pfam Leucine Rich Repeat 684 703 IPR011713 -
Vivi7g03998 1127 ProSiteProfiles TIR domain profile. 88 251 IPR000157 GO:0007165
Vivi7g03998 1127 Gene3D - 421 505 IPR042197 -
Vivi7g03998 1127 Gene3D Ribonuclease Inhibitor 798 924 IPR032675 -
Vivi7g03998 1127 Gene3D Ribonuclease Inhibitor 599 797 IPR032675 -
Vivi7g03998 1127 FunFam Disease resistance protein (TIR-NBS-LRR class) 86 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03998 Vivi-Chr7 106064928 106073176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03998 90 870 WRKY Transcription Factor Family AT4G12020 35.939 1.12e-124 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03998 - - mtr:11419915 1760.73