Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03984 ATGGAAACAGTGATTGGAGTTGAGGATTATGATGATGGGAAGCTTGAGGACAGTGGGGTTGATAGAAGCAGTTCTGCTTTGTCTTCTCCCAAACAGATTTCTAACCCGGTTGTTTATAAACTTGTTCGGGTTGAAGGTGACGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTTGAATATGAAAATAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTTTGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCAGAAGGTGTTTCACAATTAGGCACATCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGATCACCCATTCGTTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTTATAAATGAGAAGGACCAAGAAGCACCTTCTATAGCATCGAGTTTAAATTATTGTCATAGTAACCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGAGTGATAGAAAGTGGATCATCTGCTTCTGCTGTCTATTCCCCTTTGAAACCTGATTTTTCCATGACCGATGGAGAAATATGTTTAGACAAGCTGTCGATCAAAGAACTTCATGAACTGTTTAAAGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAAGAGGAGGATTGCTATGAGTTTAACAAACTCTTGTGATGTTTCAGCAACAACATTCACTATTAAAGATAACAAAATAACTAGAAAACGTGAAGAAGAATGTTCTGCAAATGTGAATGCTGCAGCTGTAATCTCTGCGGAAAATATGGCCGAAGAAGGGGATGTCAAGTATGCGGATTCATATGCAGTGGAGGGTTATGAAGTTGATGATAACCAAGTTGCTTCTGAAACAAGACTGGAAAATCGTAATACAGAACATGAATTAGAAGATGAGGATCAGCAGAGAGAACAAAGAGCTGCAAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGTACAATCCTAGGCCTTCAAGCTCTAATAGAAATATGGGACACAGACATGTTTCTCCAACTCCTTACACCAGGCCCGCTAGGAATGCTTTTCCGGAGGTAAGAACATTTGTCACCAGGTTAGACTCTCTTGGAGGTTCTGGTGTACAAATTCCATGTGTTTCTCGGGTCCGAAGAAGCCGTCCAAGGAAAAATATCACGTCTCTTATGAAATTCCATCCAACTGGCATGGTTGAAGCTGCAAAACTAAGCAATAATACCATCAGCGATCATGGTTCTGACACTGATAGTGAGGTTCAGGAGAAAGTCTCAAAGCCAAGTTCCATGCCTGTGAAGATTCAACAGCCGTCTACTTCTGAATCTGGAAAAGAGAAGCAGTGTCCGGTAATTGGCACAGCTGAACCAAGGCAAGAATTGAGACCAAAAAAGATCGATCCACCTAATCATACTGCAGAGAATAACATGGTAACTGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAACATCATCGAGCATGGACCCTTGCTGAGGTAACGAAATTGATTGAAGGTGTGTCGCGTTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCAATCCTTTTCCTCGTACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACATACACCTGCAGATGAGGGGATGAATTCACGAAAGCATGGTACGGCTCCGATTCCCGAGCATATTTTAGTTCGTGTAAGAGATCTTGCAGTGATGAATTCTCAGGTTCCTCCACATTTCAGCTCAAGCAAGTTAACAACCGGTGCAGCTAGTGTGCATGGAGGAGATAGATTGGGGTACTTGTAG 1965 0.4265 METVIGVEDYDDGKLEDSGVDRSSSALSSPKQISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGVSQLGTSEADLGKLNAKFQMLQKVKQEEKLRLSSRSPIRSHVQIDSQCSADKFPVINEKDQEAPSIASSLNYCHSNQSGSIDQCSRPSEGVIESGSSASAVYSPLKPDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFTIKDNKITRKREEECSANVNAAAVISAENMAEEGDVKYADSYAVEGYEVDDNQVASETRLENRNTEHELEDEDQQREQRAAKRMRKPTKRYIEELSENESREYNPRPSSSNRNMGHRHVSPTPYTRPARNAFPEVRTFVTRLDSLGGSGVQIPCVSRVRRSRPRKNITSLMKFHPTGMVEAAKLSNNTISDHGSDTDSEVQEKVSKPSSMPVKIQQPSTSESGKEKQCPVIGTAEPRQELRPKKIDPPNHTAENNMVTVPTAKGGMRRKHHRAWTLAEVTKLIEGVSRCGPGRWSEIKRQSFSSYSHRTSVDLKDKWRNLLKASFAHTPADEGMNSRKHGTAPIPEHILVRVRDLAVMNSQVPPHFSSSKLTTGAASVHGGDRLGYL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03984 654 Coils Coil 322 342 - -
Vivi7g03984 654 MobiDBLite consensus disorder prediction 470 493 - -
Vivi7g03984 654 MobiDBLite consensus disorder prediction 315 395 - -
Vivi7g03984 654 SUPERFAMILY Homeodomain-like 539 598 IPR009057 -
Vivi7g03984 654 Gene3D - 528 634 - -
Vivi7g03984 654 MobiDBLite consensus disorder prediction 369 385 - -
Vivi7g03984 654 Pfam Myb-like DNA-binding domain 540 588 IPR001005 -
Vivi7g03984 654 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 533 592 IPR017930 -
Vivi7g03984 654 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 635 - -
Vivi7g03984 654 SMART sant 537 590 IPR001005 -
Vivi7g03984 654 MobiDBLite consensus disorder prediction 319 368 - -
Vivi7g03984 654 MobiDBLite consensus disorder prediction 1 30 - -
Vivi7g03984 654 MobiDBLite consensus disorder prediction 454 522 - -
Vivi7g03984 654 ProSiteProfiles Myb-like domain profile. 541 588 IPR001005 -
Vivi7g03984 654 CDD SANT_TRF 539 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03984 Vivi-Chr7 105851761 105860411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03984 541 587 Single Myb Histone (SMH) Gene Family AT1G72740 44.898 9.77e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g03984 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03984 - - tpra:123883109 1032.71