Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03983 ATGGAAACAGTGATTGGAGTTGAGGATTATGATGATGGGAAGCTTGAGGACAGTGGGGTTGATAGAAGCAGTTCTGCTTTGTCTTCTCCCAAACAGATTTCTAACCCGGTTGTTTATAAACTTGTTCGGGTTGAAGGTGACGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTTGAATATGAAAATAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTTTGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCAGAAGGTGTTTCACAATTAGGCACATCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGTATATTGAACAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGATCACCCATTCGTTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTTATAAATGAGAAGGACCAAGAAGCACCTTCTATAGCATCGAGTTTAAATTATTGTCATAGTAACCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGAGTGATAGAAAGTGGATCATCTGCTTCTGCTGTCTATTCCCCTTTGAAACCTGATTTTTCCATGACCGATGGAGAAATATGTTTAGACAAGCTGTCGATCAAAGAACTTCATGAACTGTTTAAAGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAAGAGGAGGATTGCTATGAGTTTAACAAACTCTTGTGATGTTTCAGCAACAACATTCACTATTAAAGATAACAAAATAACTAGAAAACGTGAAGAAGAATGTTCTGCAAATGTGAATGCTGCAGCTGTAATCTCTGCGGAAAATATGGCCGAAGAAGGGGATGTCAAGTATGCGGATTCATATGCAGTGGAGGGTTATGAAGTTGATGATAACCAAGTTGCTTCTGAAACAAGACTGGAAAATCGTAATACAGAACATGAATTAGAAGATGAGGATCAGCAGAGAGAACAAAGAGCTGCAAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGTACAATCCTAGGCCTTCAAGCTCTAATAGAAATATGGGACACAGACATGTTTCTCCAACTCCTTACACCAGGCCCGCTAGGAATGCTTTTCCGGAGGTAAGAACATTTGTCACCAGGTTAGACTCTCTTGGAGGTTCTGGTGTACAAATTCCATGTGTTTCTCGGGTCCGAAGAAGCCGTCCAAGGAAAAATATCACGTCTCTTATGAAATTCCATCCAACTGGCATGGTTGAAGCTGCAAAACTAAGCAATAATACCATCAGCGATCATGGTTCTGACACTGATAGTGAGGTTCAGGAGAAAGTCTCAAAGCCAAGTTCCATGCCTGTGAAGATTCAACAGCCGTCTACTTCTGAATCTGGAAAAGAGAAGCAGTGTCCGGTAATTGGCACAGCTGAACCAAGGCAAGAATTGAGACCAAAAAAGATCGATCCACCTAATCATACTGCAGAGAATAACATGGTAACTGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAACATCATCGAGCATGGACCCTTGCTGAGGTAACGAAATTGATTGAAGGTGTGTCGCGTTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCAATCCTTTTCCTCGTACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACATACACCTGCAGATGAGGGGATGAATTCACGAAAGCATGGTACGGCTCCGATTCCCGAGCATATTTTAGTTCGTGTAAGAGATCTTGCAGTGATGAATTCTCAGGTTCCTCCACATTTCAGCTCAAGCAAGTTAACAACCGGTGCAGCTAGTGTGCATGGAGGAGATAGATTGGGGTACTTGTAG 1977 0.4254 METVIGVEDYDDGKLEDSGVDRSSSALSSPKQISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGVSQLGTSEADLGKLNAKFQYIEQMLQKVKQEEKLRLSSRSPIRSHVQIDSQCSADKFPVINEKDQEAPSIASSLNYCHSNQSGSIDQCSRPSEGVIESGSSASAVYSPLKPDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFTIKDNKITRKREEECSANVNAAAVISAENMAEEGDVKYADSYAVEGYEVDDNQVASETRLENRNTEHELEDEDQQREQRAAKRMRKPTKRYIEELSENESREYNPRPSSSNRNMGHRHVSPTPYTRPARNAFPEVRTFVTRLDSLGGSGVQIPCVSRVRRSRPRKNITSLMKFHPTGMVEAAKLSNNTISDHGSDTDSEVQEKVSKPSSMPVKIQQPSTSESGKEKQCPVIGTAEPRQELRPKKIDPPNHTAENNMVTVPTAKGGMRRKHHRAWTLAEVTKLIEGVSRCGPGRWSEIKRQSFSSYSHRTSVDLKDKWRNLLKASFAHTPADEGMNSRKHGTAPIPEHILVRVRDLAVMNSQVPPHFSSSKLTTGAASVHGGDRLGYL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03983 658 Coils Coil 326 346 - -
Vivi7g03983 658 MobiDBLite consensus disorder prediction 474 497 - -
Vivi7g03983 658 ProSiteProfiles Myb-like domain profile. 545 592 IPR001005 -
Vivi7g03983 658 MobiDBLite consensus disorder prediction 319 399 - -
Vivi7g03983 658 Pfam Myb-like DNA-binding domain 544 592 IPR001005 -
Vivi7g03983 658 Gene3D - 532 638 - -
Vivi7g03983 658 SMART sant 541 594 IPR001005 -
Vivi7g03983 658 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 639 - -
Vivi7g03983 658 MobiDBLite consensus disorder prediction 373 389 - -
Vivi7g03983 658 MobiDBLite consensus disorder prediction 323 372 - -
Vivi7g03983 658 MobiDBLite consensus disorder prediction 458 526 - -
Vivi7g03983 658 MobiDBLite consensus disorder prediction 1 30 - -
Vivi7g03983 658 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 537 596 IPR017930 -
Vivi7g03983 658 SUPERFAMILY Homeodomain-like 543 602 IPR009057 -
Vivi7g03983 658 CDD SANT_TRF 543 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03983 Vivi-Chr7 105851761 105860411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03983 545 591 Single Myb Histone (SMH) Gene Family AT1G72740 44.898 1.04e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g03983 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03983 - - tpra:123883109 1046.57