Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03982 ATGGAAACAGTGATTGGAGTTGAGGATTATGATGATGGGAAGCTTGAGGACAGTGGGGTTGATAGAAGCAGTTCTGCTTTGTCTTCTCCCAAACAGATTTCTAACCCGGTTGTTTATAAACTTGTTCGGGTTGAAGGTGACGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTTGAATATGAAAATAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTTTGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCAGAAGGCACATCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGATCACCCATTCGTTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTTATAAATGAGAAGGACCAAGAAGCACCTTCTATAGCATCGAGTTTAAATTATTGTCATAGTAACCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGAGTGATAGAAAGTGGATCATCTGCTTCTGCTGTCTATTCCCCTTTGAAACCTGATTTTTCCATGACCGATGGAGAAATATGTTTAGACAAGCTGTCGATCAAAGAACTTCATGAACTGTTTAAAGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAAGAGGAGGATTGCTATGAGTTTAACAAACTCTTGTGATGTTTCAGCAACAACATTCACTATTAAAGATAACAAAATAACTAGAAAACGTGAAGAAGAATGTTCTGCAAATGTGAATGCTGCAGCTGTAATCTCTGCGGAAAATATGGCCGAAGAAGGGGATGTCAAGTATGCGGATTCATATGCAGTGGAGGGTTATGAAGTTGATGATAACCAAGTTGCTTCTGAAACAAGACTGGAAAATCGTAATACAGAACATGAATTAGAAGATGAGGATCAGCAGAGAGAACAAAGAGCTGCAAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGTACAATCCTAGGCCTTCAAGCTCTAATAGAAATATGGGACACAGACATGTTTCTCCAACTCCTTACACCAGGCCCGCTAGGAATGCTTTTCCGGAGGTAAGAACATTTGTCACCAGGTTAGACTCTCTTGGAGGTTCTGGTGTACAAATTCCATGTGTTTCTCGGGTCCGAAGAAGCCGTCCAAGGAAAAATATCACGTCTCTTATGAAATTCCATCCAACTGGCATGGTTGAAGCTGCAAAACTAAGCAATAATACCATCAGCGATCATGGTTCTGACACTGATAGTGAGGTTCAGGAGAAAGTCTCAAAGCCAAGTTCCATGCCTGTGAAGATTCAACAGCCGTCTACTTCTGAATCTGGAAAAGAGAAGCAGTGTCCGGTAATTGGCACAGCTGAACCAAGGCAAGAATTGAGACCAAAAAAGATCGATCCACCTAATCATACTGCAGAGAATAACATGGTAACTGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAACATCATCGAGCATGGACCCTTGCTGAGGTAACGAAATTGATTGAAGGTGTGTCGCGTTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCAATCCTTTTCCTCGTACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACATACACCTGCAGATGAGGGGATGAATTCACGAAAGCATGGTACGGCTCCGATTCCCGAGCATATTTTAGTTCGTGTAAGAGATCTTGCAGTGATGAATTCTCAGGTTCCTCCACATTTCAGCTCAAGCAAGTTAACAACCGGTGCAGCTAGTGTGCATGGAGGAGATAGATTGGGGTACTTGTAG 1950 0.4272 METVIGVEDYDDGKLEDSGVDRSSSALSSPKQISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGTSEADLGKLNAKFQMLQKVKQEEKLRLSSRSPIRSHVQIDSQCSADKFPVINEKDQEAPSIASSLNYCHSNQSGSIDQCSRPSEGVIESGSSASAVYSPLKPDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFTIKDNKITRKREEECSANVNAAAVISAENMAEEGDVKYADSYAVEGYEVDDNQVASETRLENRNTEHELEDEDQQREQRAAKRMRKPTKRYIEELSENESREYNPRPSSSNRNMGHRHVSPTPYTRPARNAFPEVRTFVTRLDSLGGSGVQIPCVSRVRRSRPRKNITSLMKFHPTGMVEAAKLSNNTISDHGSDTDSEVQEKVSKPSSMPVKIQQPSTSESGKEKQCPVIGTAEPRQELRPKKIDPPNHTAENNMVTVPTAKGGMRRKHHRAWTLAEVTKLIEGVSRCGPGRWSEIKRQSFSSYSHRTSVDLKDKWRNLLKASFAHTPADEGMNSRKHGTAPIPEHILVRVRDLAVMNSQVPPHFSSSKLTTGAASVHGGDRLGYL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03982 649 SUPERFAMILY Homeodomain-like 534 593 IPR009057 -
Vivi7g03982 649 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 528 587 IPR017930 -
Vivi7g03982 649 MobiDBLite consensus disorder prediction 364 380 - -
Vivi7g03982 649 Gene3D - 523 629 - -
Vivi7g03982 649 MobiDBLite consensus disorder prediction 314 363 - -
Vivi7g03982 649 MobiDBLite consensus disorder prediction 449 517 - -
Vivi7g03982 649 CDD SANT_TRF 534 584 - -
Vivi7g03982 649 Pfam Myb-like DNA-binding domain 535 583 IPR001005 -
Vivi7g03982 649 Coils Coil 317 337 - -
Vivi7g03982 649 MobiDBLite consensus disorder prediction 465 488 - -
Vivi7g03982 649 ProSiteProfiles Myb-like domain profile. 536 583 IPR001005 -
Vivi7g03982 649 MobiDBLite consensus disorder prediction 1 30 - -
Vivi7g03982 649 SMART sant 532 585 IPR001005 -
Vivi7g03982 649 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 630 - -
Vivi7g03982 649 MobiDBLite consensus disorder prediction 310 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03982 Vivi-Chr7 105851759 105860411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03982 536 582 Single Myb Histone (SMH) Gene Family AT1G72740 44.898 1.00e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g03982 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03982 - - tpra:123883109 1017.68