Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03981 ATGGAAACAGTGATTGGAGTTGAGGATTATGATGATGGGAAGCTTGAGGACAGTGGGGTTGATAGAAGCAGTTCTGCTTTGTCTTCTCCCAAACAGATTTCTAACCCGGTTGTTTATAAACTTGTTCGGGTTGAAGGTGACGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGAGGATTTTCTTGAATATGAAAATAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTTTGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCAGAAGGCACATCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGTATATTGAACAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGATCACCCATTCGTTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTTATAAATGAGAAGGACCAAGAAGCACCTTCTATAGCATCGAGTTTAAATTATTGTCATAGTAACCAATCTGGGAGTATTGATCAGTGTTCCAGACCTTCAGAAGGAGTGATAGAAAGTGGATCATCTGCTTCTGCTGTCTATTCCCCTTTGAAACCTGATTTTTCCATGACCGATGGAGAAATATGTTTAGACAAGCTGTCGATCAAAGAACTTCATGAACTGTTTAAAGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAAGAGGAGGATTGCTATGAGTTTAACAAACTCTTGTGATGTTTCAGCAACAACATTCACTATTAAAGATAACAAAATAACTAGAAAACGTGAAGAAGAATGTTCTGCAAATGTGAATGCTGCAGCTGTAATCTCTGCGGAAAATATGGCCGAAGAAGGGGATGTCAAGTATGCGGATTCATATGCAGTGGAGGGTTATGAAGTTGATGATAACCAAGTTGCTTCTGAAACAAGACTGGAAAATCGTAATACAGAACATGAATTAGAAGATGAGGATCAGCAGAGAGAACAAAGAGCTGCAAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGTACAATCCTAGGCCTTCAAGCTCTAATAGAAATATGGGACACAGACATGTTTCTCCAACTCCTTACACCAGGCCCGCTAGGAATGCTTTTCCGGAGGTAAGAACATTTGTCACCAGGTTAGACTCTCTTGGAGGTTCTGGTGTACAAATTCCATGTGTTTCTCGGGTCCGAAGAAGCCGTCCAAGGAAAAATATCACGTCTCTTATGAAATTCCATCCAACTGGCATGGTTGAAGCTGCAAAACTAAGCAATAATACCATCAGCGATCATGGTTCTGACACTGATAGTGAGGTTCAGGAGAAAGTCTCAAAGCCAAGTTCCATGCCTGTGAAGATTCAACAGCCGTCTACTTCTGAATCTGGAAAAGAGAAGCAGTGTCCGGTAATTGGCACAGCTGAACCAAGGCAAGAATTGAGACCAAAAAAGATCGATCCACCTAATCATACTGCAGAGAATAACATGGTAACTGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAACATCATCGAGCATGGACCCTTGCTGAGGTAACGAAATTGATTGAAGGTGTGTCGCGTTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCAATCCTTTTCCTCGTACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACATACACCTGCAGATGAGGGGATGAATTCACGAAAGCATGGTACGGCTCCGATTCCCGAGCATATTTTAGTTCGTGTAAGAGATCTTGCAGTGATGAATTCTCAGGTTCCTCCACATTTCAGCTCAAGCAAGTTAACAACCGGTGCAGCTAGTGTGCATGGAGGAGATAGATTGGGGTACTTGTAG 1962 0.4261 METVIGVEDYDDGKLEDSGVDRSSSALSSPKQISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSLECISIERSSSGKLRLECSEGTSEADLGKLNAKFQYIEQMLQKVKQEEKLRLSSRSPIRSHVQIDSQCSADKFPVINEKDQEAPSIASSLNYCHSNQSGSIDQCSRPSEGVIESGSSASAVYSPLKPDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFTIKDNKITRKREEECSANVNAAAVISAENMAEEGDVKYADSYAVEGYEVDDNQVASETRLENRNTEHELEDEDQQREQRAAKRMRKPTKRYIEELSENESREYNPRPSSSNRNMGHRHVSPTPYTRPARNAFPEVRTFVTRLDSLGGSGVQIPCVSRVRRSRPRKNITSLMKFHPTGMVEAAKLSNNTISDHGSDTDSEVQEKVSKPSSMPVKIQQPSTSESGKEKQCPVIGTAEPRQELRPKKIDPPNHTAENNMVTVPTAKGGMRRKHHRAWTLAEVTKLIEGVSRCGPGRWSEIKRQSFSSYSHRTSVDLKDKWRNLLKASFAHTPADEGMNSRKHGTAPIPEHILVRVRDLAVMNSQVPPHFSSSKLTTGAASVHGGDRLGYL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03981 653 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 532 591 IPR017930 -
Vivi7g03981 653 Pfam Myb-like DNA-binding domain 539 587 IPR001005 -
Vivi7g03981 653 SUPERFAMILY Homeodomain-like 538 597 IPR009057 -
Vivi7g03981 653 SMART sant 536 589 IPR001005 -
Vivi7g03981 653 MobiDBLite consensus disorder prediction 368 384 - -
Vivi7g03981 653 MobiDBLite consensus disorder prediction 318 367 - -
Vivi7g03981 653 ProSiteProfiles Myb-like domain profile. 540 587 IPR001005 -
Vivi7g03981 653 MobiDBLite consensus disorder prediction 453 521 - -
Vivi7g03981 653 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 634 - -
Vivi7g03981 653 CDD SANT_TRF 538 588 - -
Vivi7g03981 653 Coils Coil 321 341 - -
Vivi7g03981 653 MobiDBLite consensus disorder prediction 469 492 - -
Vivi7g03981 653 Gene3D - 527 633 - -
Vivi7g03981 653 MobiDBLite consensus disorder prediction 1 30 - -
Vivi7g03981 653 MobiDBLite consensus disorder prediction 314 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03981 Vivi-Chr7 105851759 105860411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03981 540 586 Single Myb Histone (SMH) Gene Family AT1G72740 44.898 9.75e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi7g03981 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03981 - - tpra:123883109 1031.55