Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03971 ATGTTGACTTGCATAGCTTGTTCAAAGCAAGTCAATAATGGATCTCTTCATCAACAAGATGAGGAAGAAGCTGTGCAAACACCTAGCACCAAACAAGCTGCCATCAAGGCTCTCACAGCTCAGATCAAGGATATGGCAGTTAAGGCTTCTGGGGCCTATAAGAATTGCAAGCCTTGTTCAGGATCTACCAATGGGAACAAGAACAAAAAGTATGCTGATTCTGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCTTACCGAAGGCCCGGGAGCGCGAATTCAACACCAAGAATGTGGGGGAAGGAAATGGAAGCTAGACTCAAAGGGATTTCCAGTGGAGAAGCAACACCAACTTCGGTGAGCGGACGTACCGAGTCGGTTGCGTTTATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAACCAGGTGTGCTTATTACTTTTGTGTCATTGGCTCAAGGTGGGAATGATCTGAAGAAGATACGTTTCAGCCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGGAGAGAACTATGACAAAGTTATGGAGTTGTACAATGTTCAAAGGTTCAATCAACAAGCAGTTCCTCTTCCAACCCCACCTATTTCTGAAGATGAGAGTTCAAAGATTGAATCTGCAAGAGATAGCCCAGTCACGCCTCCTCTAAGCAAAGAGCGTCTGCCCCGTCATTTACATCACCCAACAGGAATGGGCTACTCCTCGTCAGATTCACTGGAACATCACCACATGCATCCACAGCCTTGCTATGAGTCAAGCGGCCTGGCATCAAAACCTAATCTTTCCGATATTGGTGTGCCAAAGACCGAAAGATCATCCGTCGATGCTTCTGTAAGGACGAGTTCATCAGAAGAGGAAGATGATCACTCAGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTACCAGGCGGAACCAGAGAACTCAGGCGCGTCCGCTTCAGCCGAGAGAAGTTCGGAGAAACGCGTGCTAGGTTATGGTGGGAAGAGAACCGTGCGAGGATACAAGAGCAATACTTGTGA 1116 0.4695 MLTCIACSKQVNNGSLHQQDEEEAVQTPSTKQAAIKALTAQIKDMAVKASGAYKNCKPCSGSTNGNKNKKYADSDMGSDSARFNWAYRRPGSANSTPRMWGKEMEARLKGISSGEATPTSVSGRTESVAFMEEEDEPKEWVAQVEPGVLITFVSLAQGGNDLKKIRFSREMFNKWQAQRWWGENYDKVMELYNVQRFNQQAVPLPTPPISEDESSKIESARDSPVTPPLSKERLPRHLHHPTGMGYSSSDSLEHHHMHPQPCYESSGLASKPNLSDIGVPKTERSSVDASVRTSSSEEEDDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGETRARLWWEENRARIQEQYL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03971 371 MobiDBLite consensus disorder prediction 202 307 - -
Vivi7g03971 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 371 IPR044532 -
Vivi7g03971 371 Pfam Transcription factor regulating root and shoot growth via Pin3 315 370 IPR013591 -
Vivi7g03971 371 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Vivi7g03971 371 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Vivi7g03971 371 Pfam Transcription factor BRX N-terminal domain 22 59 IPR027988 -
Vivi7g03971 371 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03971 Vivi-Chr7 105663040 105667401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03971 1 371 Major Intrinsic Protein MIP AT1G31880 45.758 3.80e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03971 - - gmx:100805480 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03971 7 105663040 105667401 Vivi7g03971 7 105663040 105667401 ECH