Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03962 ATGAGCATGACTGTTGCTGAGGATGAATCAGAGGGAGAGATTCATGTCCCAGCTGAAATTGATTGGAAAATGCTTGATAAATCGAAGTTTTTCTTCCTTGGTGCTGCTTTATTTTCTGGTGTTTCAGCGACATTGTATCCGGTTGTTGTGTTGAAAACTAGGCAACAAGTTGCTCAATCTCAGGTTTCTTGTATCAAGACTACGTTTTCGTTGATTAAGGGCGAGGGGTTTAGAGCTTTGTATCGTGGGTTTGGTACTTCGTTGATGGGTACGATTCCTGCTAGAGCTTTATATATGGCTGCACTTGAGGTTACTAAGAGTAATGTGGGGACTGCTACGGTTGGTTTTGGACTTGCTGAACCGACTGCTGCTGCGATTGCTAATGCAGTTGCTGGTTTGACTGCAGCTTTGGCGGCTCAGCTTGTGTGGACCCCGGTTGATGTTGTGAGCCAAAGGTTGATGGTTCAAGGTGGTTGTAAATCGAGTGATCCTAAGGGTTCTTCGGTTAGGTATGTGAATGGAATTGATGCGTTTAGGAAAATTGTTAAGACGGATGGTCCTAGGGGTTTGTATAGAGGTTTTGGGATATCGGTTTTGACGTATGCGCCTAGTAATGCAGTATGGTGGGCATCATATTCTGTTACACAAAGGATGGTTTGGGGTGGAGTAGGATATTACTTGAGTAGCAAGAAAGGTGGGGAGGGGAGTGATAATAACAACGGGACTAATGCATTGAGGCCGGATACGAAAACGATTATGGCTGTTCAGGGGGTCAGTGCAGCAATGGCGGGAGGTATGTCTGCGTTGATTACTATGCCATTGGATACAATCAAGACAAGGCTGCAAGTCTTGGACGGCGATGAGAATGGCCGCCGTGGACCAACTGTGATGCAGACGGTTAGAGGTTTGGTTAAGGAAGGCGGTTGGACGGCTTGTTATAGAGGATTAGGACCTAGATGGGCTTCAATGTCAGTGTCTGCAACAACAATGATCACAACCTATGAGTTGCTTAAACGACTTTCTGCAAAGAGTCAAGATGTTTTGACATGA 1050 0.4552 MSMTVAEDESEGEIHVPAEIDWKMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTTFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVGFGLAEPTAAAIANAVAGLTAALAAQLVWTPVDVVSQRLMVQGGCKSSDPKGSSVRYVNGIDAFRKIVKTDGPRGLYRGFGISVLTYAPSNAVWWASYSVTQRMVWGGVGYYLSSKKGGEGSDNNNGTNALRPDTKTIMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRGLVKEGGWTACYRGLGPRWASMSVSATTMITTYELLKRLSAKSQDVLT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03962 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 345 - -
Vivi7g03962 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 251 340 IPR018108 -
Vivi7g03962 349 Pfam Mitochondrial carrier protein 255 343 IPR018108 -
Vivi7g03962 349 Pfam Mitochondrial carrier protein 125 219 IPR018108 -
Vivi7g03962 349 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Vivi7g03962 349 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Vivi7g03962 349 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Vivi7g03962 349 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Vivi7g03962 349 PRINTS Mitochondrial carrier protein signature 260 282 IPR002067 GO:0055085
Vivi7g03962 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
Vivi7g03962 349 Gene3D Mitochondrial carrier domain 30 347 IPR023395 -
Vivi7g03962 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Vivi7g03962 349 SUPERFAMILY Mitochondrial carrier 23 337 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03962 Vivi-Chr7 105561815 105563663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03962 1 346 Chloroplast and Mitochondria Gene Families AT1G72820 73.352 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03962 K15121 - gmx:100784616 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03962 7 105561815 105563663 Vivi7g03962 7 105561815 105563663 ECH