Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03937 ATGAGCAGCAGCAAAAACAACCAAACCGAAACAGCAAACTCCCTAGATTTCAAAAAACTAAAAATCATATCCGCCGTGGGACGCGGCGCCAAGGGCGTCGTGTTTCTCGCGCGAACCGGTTACCGGTCATCAGACGAGTGCCTTGCTCTGAAAGTAACATCCAAAGCTCTTATACATCAAAAGAACGCAAAGAATAATTCAAAAGGCTCCGGCGAGTACAAGAGAGCGTCGTTTGAAGAAGAAGTGCTACGTCGTTTCGATCATCCACTTCTACCACGGTTGCGAGGTGTGTTCGAAACCGAGAAAATCGTTGGATTCGCCATTGATTATTGCCATGGCGGGAACCTCCATTCTCTCAGAAAAAAACAAACTGAGAAAATGTTCTCCGATGATGCCATTAGGTTTTACGCTGCTGAATTGGTTCTTGCATTGGAGTATCTTCATCATCAAGGAATAGTGTATAGAGATTTGAAACCAGAGAACGTGATGATTCAAGAAAACGGTCACATAATGCTCGTAGATTTCGATCTATCTACAAAGCTGAAAGCTAAATCACCAACTCAATCACTGAGTAATGACTCGTCGGATAGATCTAAGTCTAACTTATCAAAAGAGAAACATACAAAGAAGCGGTTGATCTCGCGATTCTCCCGATGTAACTCGGGGATCTCACCGTGTGACTCGGATTTTGACTCGCAGCCCGGTGTGAACTCAGTGAATAGAAACGAGTCGGAATCGGTTGAATCAGTTGAAAAATCGAACTCGTTCGTTGGAACGGAAGATTACGTGGCACCTGAAATCGTACTTGGAAAAGGTCACGGTTTTGAAGTTGATTGGTGGTCGTTAGGGGTCGTTTTACACGAGATGCTGTATGGAACGACGCCGTTTAACGGGACGAATAGGAAAGAAACGTTTTACAGGATTTTGTCAAAGGAACCTGAGTTAACGGGTGAGAAAACGGCGTTAAGGGACTTGATACGCAAATTGTTGGAAAAGGATCCTGACCGTAGGATCAAGGTGGATGAGATCAAGGGTCATGATTTCTTTAAAGGAGTTATGTGGGACAGGGTGGTTGAATTGGCAAGACCACCTTATATTCCTTGTATTGAAGTTGAGAATGAGAATACTAAAGGGTATAGTAAGAAATATGTGGAGGTTTTTGTTCATGAAGTGTTTTTTCCTGAGGGTGGTGATAATAATGAAGAGAAGAAGAATAAAATGGAAGATAAGAAGGTTAATGGTGAAGATAAAACAGGGTGGGTTGATAAATTGAGTAATAGTCTCAATGAGGATGAGGATTTTTTAATTTTTTGA 1314 0.4224 MSSSKNNQTETANSLDFKKLKIISAVGRGAKGVVFLARTGYRSSDECLALKVTSKALIHQKNAKNNSKGSGEYKRASFEEEVLRRFDHPLLPRLRGVFETEKIVGFAIDYCHGGNLHSLRKKQTEKMFSDDAIRFYAAELVLALEYLHHQGIVYRDLKPENVMIQENGHIMLVDFDLSTKLKAKSPTQSLSNDSSDRSKSNLSKEKHTKKRLISRFSRCNSGISPCDSDFDSQPGVNSVNRNESESVESVEKSNSFVGTEDYVAPEIVLGKGHGFEVDWWSLGVVLHEMLYGTTPFNGTNRKETFYRILSKEPELTGEKTALRDLIRKLLEKDPDRRIKVDEIKGHDFFKGVMWDRVVELARPPYIPCIEVENENTKGYSKKYVEVFVHEVFFPEGGDNNEEKKNKMEDKKVNGEDKTGWVDKLSNSLNEDEDFLIF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03937 437 Pfam Protein kinase domain 22 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03937 437 Pfam Protein kinase domain 246 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03937 437 Gene3D Transferase(Phosphotransferase) domain 1 249 368 - -
Vivi7g03937 437 Gene3D Transferase(Phosphotransferase) domain 1 115 190 - -
Vivi7g03937 437 Gene3D Phosphorylase Kinase; domain 1 20 114 - -
Vivi7g03937 437 ProSiteProfiles Protein kinase domain profile. 20 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03937 437 MobiDBLite consensus disorder prediction 230 251 - -
Vivi7g03937 437 SUPERFAMILY Protein kinase-like (PK-like) 18 372 IPR011009 -
Vivi7g03937 437 MobiDBLite consensus disorder prediction 185 209 - -
Vivi7g03937 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Vivi7g03937 437 FunFam Serine/threonine-protein kinase OXI1 115 183 - -
Vivi7g03937 437 FunFam Serine/threonine-protein kinase OXI1 251 368 - -
Vivi7g03937 437 PANTHER FLIPPASE KINASE 1-RELATED 8 375 - -
Vivi7g03937 437 SMART serkin_6 20 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03937 Vivi-Chr7 105344049 105345897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03937 12 437 AGC Kinase Gene Family AT3G25250 55.378 4.11e-153 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi7g03937 Pkinase 6.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03937 K20714 - gmx:100785773 526.168