Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03934 ATGTTACCACCATCTTCATCTTCCAACCCTCAATTGATGCACGACGTATTCCTCAACTTCAGAGGGGAAGATACTCGTACCAGCTTTGTTTCTCATCTCGACGCAGCCCTCTCAAATGCAGGAATCAACACTTACATTGACCGTCAGCTTCCCAAGGGAACCGAGTTGGGATCAGAACTATCGAGGGCAATACGAATGTCTCATATATCTATTGTTGTTTTCTCCAAAAGATATACAGAATCCAGTTGGTGTCTTTACGAACTCAAAGAGATAATGAGTTGCCATAGAACTAATGGTCAGTTGGTTGTCCCTATATTTTTTGATATTGACCCTTCCGTTGTGCGCCACCAGAATGGTGAATTCGGAGATAGTTTGAGAGCTACCGCAGAAAAAATATACTTTGACTTTGCAGGGGAAAGGATGGAATATGTACTCTCTAGTTGGAGGAATGTGCTCACTCAAGCTGCTAATTTGTCTGGTTGGCATATCCCCAAATGCAGCAATGAAAGTGAACTAGTGCAGCAGATTGTTGAGGATGTTTTGGAAAAACTAGGCAGCGCATTTTTGTCTATTACCGAATTTCCAGTTGGATTAGAATCCCATGTGCGAAATGCGACAGACTTTATTGAAAATCAACTAAAGAAGGTTTGTGTGATAGGGATTTGGGGGATGGGCGGATCTGGTAAGACTACCACAGCCAAAGCCATCTACAATCAAATTCACCGCAAATTTGTGGATAGAAGTTTCATTGAAAATGTTAGAGAAGTTTGTAAAAAGGAAATTAGAGGGATTATTCATTTACAACAACAACTTCTTTCAGATATCATGAACACAAAGGAGAAGATACGTAGCACTGCGTTGGGGACGAGTATGATCAGGAAAAGATTTCAGGGGAAAAAAGTACTTGTTGTTCTTGATGACGTGACCACATTTGAACAGCTAAAAGCGCTATGTGCAGATTCAAAATTGTTTGGTCCGGGAAGTGTATTAATTGTTACAACCAGAGATGCTCGCCTGCTTAAAGGCGTTAATCATGTTTGTACTCTGAAAGAAATGGACGAAAAAGAGTCCCTTGAGCTTTTCAGTTGGCACGCTTTTAGACAGCCGAGTCCAATAAAAGACTTCCGCAAACTCTCGAGAAACGTAGTTGCTTATTGTGGAGGATTACCACTGGCTCTCGAAGTCATTGGTTCTTACTTAAGTGAGAGGACAAAACAAGAATGGAAATGTGTACTCTCGAAATTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAACTGAGAGTAAGCTATGATGGTTTAAAGGATGATATGGAAAAGGATATATTTCTTGATATATGTTTTTTCTTTATCGGCAAGGACAGAGCCTATGTTACGGAGATACTAACTGGTTGTGGACTTCATGCTGGTATTGGAATAACTCTTCTTGTAGAGCGGAGCCTTGTAAAAATTGAAAAGAATAACAAGCTTGGAATGCATGATTTAATTAGAGACATGGGAAGAGAAATTGTTCGTAATAGTTCAGCAAAAGATCCTGGAAAGCGTAGTCGGTTATGGTTTCACCAGGATGTACATGAAATTTTGACCAAAAATTCGGGAACAGAAACTGTTGAGGGGTTGGTTTTGAAGTTGCAAGGAACCAACAGAGTTTGCTTCAGTGCTAATTCTTTCAAGGAGATGAAGAATCTGAGACTTCTACAACTTGATAGCGTTGACCTCGCTGGAGATTACGGGTGTCTTTCTAAAGAACTTAGATGGATCTGTTGGCAAGAATTTACCTTCAACCGAATACCAGATGAATTTTATTTGGGAAATCTAGTTGTTATCGAGTTAAAACACAGCAGTATCAAACAAGTTTGGAATGAAACCAAGTTGCTGGGGAACCTAAAAATTCTTAATCTTAGTCATTCCAAGTACTTGAAAAGCACTCCTGACTTTTCCAAATCACCAAATCTAGAAAAGCTCATCATGAAGGATTGTCCAAAATTGTCTGAGGTACACCAATCCATTGGAGATCTCAATAACCTTCTTCTGATAAATTTGAAGGACTGTACAAATCTTAGCGATCTTCCAAGAAAGATCTATCAATTGAAGTCTTTGAAAACTCTCATCCTTTCCGGTTGTTCAAAAATTGACAAGTTGGATGAAGACATAGTGCAAATGGAATCCTTGACAACACTGATCGCAAAAGATACAGCTATAAAAGAGGTTCCTTATTCAATAGTAAGATCGAAAAGTATAGGATATATATCCCTATGTGGCTATGAAGGATTAACACGCGATTTTTTTCCTTCTCTCATTTGGTCTTGGACGTCTCCAACAATGAATTGTCTACCTCAAATTTCCCCATTTGGTAACATGGCTTTGACTCTAACTTCCATCAATGTACAAAATAATAACTTGGGCTTTCTATCACCAATGATTAAGAGCTTTTCACAACTCAGAACTGTTTGGGTGCAATGCCACTCAAAGATTCAGCTAACTCAAGAATTACGAAGAATTCTTGATGATCAATATGATGTTAGCCGTACTGAGTTGGAAGCATCACAAATCTCGAATCTTTCCTTGAGATCGCTTTTGATTGGAATGGGAAGTTGCCACACAGTCATGGATACTCTTTGCAAGAGCATATCACAGGGATTGACAGCCAATGATTCGAACAATTTCTCCCTTCCTGGTTGCAATTTTCCCTCTTGGCTAGCCTATACAGGCGAAGGACATTCAGCACAATTTCAAGTTCCTAAGGATATTGATTGTCACGTGAAGGGAATAGTTTTATGTGTTGTTTATTCATCAACATCTGAAAACATGGGAGCTGAATGTCTTACTAGTATCTTGATTGTTAATTACACAAAATGCATCGTTCAGATATACAAGCGTGACACAATAATGTCTTTTAATGATGAAGATTGGAAGAATGTAGCATCAAATCTAGAACCCGGTGACGACGTGGAGATCTTTGTAGCTTTTGGCCGGGGAATAATTGTTAAGGAGACCGCTGTCTTTACGATATATGGCCTGCCAATAACTACAGAATTTGAGCAGTCAACTATTACGGAAGTTGATTCATCAACTAACATGGAAATGGAACCATCAGAGGAAAACAGCTTGCCTCCATCACTTAAAGTGAACATGCAATCACCAGCTAATGTGACAGTGGAGGCATCAGCTGATGCTAAATCGAATCCGTCACCTAAAGTGAAGGTTGAGTCGTCATCATCTATCATGAAAATAGAGCCAACATCAAAGTCCAATAAAAGGAGACAATTTGCAAGACTTGCAAAAAGAATGGGTGCATGTTTATGCTTGACTCAGCATAGAGATAAAGGTTTGAACAATTTGTTATAG 3348 0.3919 MLPPSSSSNPQLMHDVFLNFRGEDTRTSFVSHLDAALSNAGINTYIDRQLPKGTELGSELSRAIRMSHISIVVFSKRYTESSWCLYELKEIMSCHRTNGQLVVPIFFDIDPSVVRHQNGEFGDSLRATAEKIYFDFAGERMEYVLSSWRNVLTQAANLSGWHIPKCSNESELVQQIVEDVLEKLGSAFLSITEFPVGLESHVRNATDFIENQLKKVCVIGIWGMGGSGKTTTAKAIYNQIHRKFVDRSFIENVREVCKKEIRGIIHLQQQLLSDIMNTKEKIRSTALGTSMIRKRFQGKKVLVVLDDVTTFEQLKALCADSKLFGPGSVLIVTTRDARLLKGVNHVCTLKEMDEKESLELFSWHAFRQPSPIKDFRKLSRNVVAYCGGLPLALEVIGSYLSERTKQEWKCVLSKLERIPNDQVQEKLRVSYDGLKDDMEKDIFLDICFFFIGKDRAYVTEILTGCGLHAGIGITLLVERSLVKIEKNNKLGMHDLIRDMGREIVRNSSAKDPGKRSRLWFHQDVHEILTKNSGTETVEGLVLKLQGTNRVCFSANSFKEMKNLRLLQLDSVDLAGDYGCLSKELRWICWQEFTFNRIPDEFYLGNLVVIELKHSSIKQVWNETKLLGNLKILNLSHSKYLKSTPDFSKSPNLEKLIMKDCPKLSEVHQSIGDLNNLLLINLKDCTNLSDLPRKIYQLKSLKTLILSGCSKIDKLDEDIVQMESLTTLIAKDTAIKEVPYSIVRSKSIGYISLCGYEGLTRDFFPSLIWSWTSPTMNCLPQISPFGNMALTLTSINVQNNNLGFLSPMIKSFSQLRTVWVQCHSKIQLTQELRRILDDQYDVSRTELEASQISNLSLRSLLIGMGSCHTVMDTLCKSISQGLTANDSNNFSLPGCNFPSWLAYTGEGHSAQFQVPKDIDCHVKGIVLCVVYSSTSENMGAECLTSILIVNYTKCIVQIYKRDTIMSFNDEDWKNVASNLEPGDDVEIFVAFGRGIIVKETAVFTIYGLPITTEFEQSTITEVDSSTNMEMEPSEENSLPPSLKVNMQSPANVTVEASADAKSNPSPKVKVESSSSIMKIEPTSKSNKRRQFARLAKRMGACLCLTQHRDKGLNNLL 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03934 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 446 IPR027417 -
Vivi7g03934 1115 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 738 IPR044974 GO:0006952
Vivi7g03934 1115 MobiDBLite consensus disorder prediction 1054 1087 - -
Vivi7g03934 1115 FunFam Disease resistance protein (TIR-NBS-LRR class) 353 435 - -
Vivi7g03934 1115 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 161 IPR035897 -
Vivi7g03934 1115 PRINTS Disease resistance protein signature 386 400 - -
Vivi7g03934 1115 PRINTS Disease resistance protein signature 295 309 - -
Vivi7g03934 1115 PRINTS Disease resistance protein signature 218 233 - -
Vivi7g03934 1115 PRINTS Disease resistance protein signature 695 711 - -
Vivi7g03934 1115 Gene3D - 190 348 IPR027417 -
Vivi7g03934 1115 Gene3D Ribonuclease Inhibitor 524 896 IPR032675 -
Vivi7g03934 1115 ProSiteProfiles TIR domain profile. 12 184 IPR000157 GO:0007165
Vivi7g03934 1115 Pfam NB-ARC domain 209 427 IPR002182 GO:0043531
Vivi7g03934 1115 SUPERFAMILY L domain-like 492 821 - -
Vivi7g03934 1115 Pfam TIR domain 14 191 IPR000157 GO:0007165
Vivi7g03934 1115 Gene3D - 8 189 IPR035897 -
Vivi7g03934 1115 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 186 - -
Vivi7g03934 1115 SMART till_3 13 158 IPR000157 GO:0007165
Vivi7g03934 1115 MobiDBLite consensus disorder prediction 1054 1080 - -
Vivi7g03934 1115 Gene3D - 351 435 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03934 Vivi-Chr7 105312123 105316435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03934 14 741 WRKY Transcription Factor Family AT4G12020 29.787 1.73e-73 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03934 - - mtr:11424959 1366.29