Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03933 ATGGATTCTTCTTCATCATCATCCTTAAAATTCAATGATAAATGGATCTACGACGTGTTCGTCAGCTATTTAGGGAAAGACACGGGTCAGAATTTCGTTTCACATCTACAAACTGCACTCACAATTGCAGGAATTACCACTTGTATCAACTATCGGATTGGAAATGGAACCGAGCTGGGACCAGAACTTTCACGAGCAATAGGATGGTCTCGTATATCTATCCTTGTTTTCTCCCGAAACTACACTCAATCTAGTTGGTGTCTTAACGAACTTCAAAAAGTCATGGAATGCCACAGAACTGGTGACCAGGCTGTTGTCCCTGTGTTTTATGATGTTGATCCATCGGTTGTACGCCTCCAGAATGGTGGTTTTGGAAAAGATTTGAGAGCCACCGCAAAAAGAATCTCAGCAAAGGGAAAGATGGAACATGTGCTGTCTAGTTGGAGGAAGGCACTCACCGAAGCTGCTAATTTGTTAGGTTGGGATGCCACCAAGTACAGGTATAAAGATGAACTAGTGCAGCGAATTGTTGAGGATGTTTTGAGAAAGCTAAACAGGGGATTATTGAATATTACCAAATTTCCAGTTGGATTGCATGCCCATGTGCAACAAGTGATACAGTTTATTGAAAATCAGTCAAGCAAAGTTTGTTTGATAGGGATCTGGGGTATGGGTGGATTGGGTAAAACAACAACAGCCAGAGCTGTCTACAACCAAATTCATTACAAATTTGATGACCTGAGCTTCATTGAAAATATTAGAGAAGTTTGTACAAAAGGTGACGGAGAGATTATTCATTTACAAGAACAGCCTCTTTCAAATGTCTTGGAAACAAATGAGAAGATACATACTACATATGGGATATCCACAACTGAGAAAAGATTTATAGGGAAAAAGGTACTCATTGTACTCGATGATGTGAGCACATTTGGTCAAGTAGAAGCCCTGTGTGGAAACCGTAAATGTTATGGTCTAGGAAGTGTATTGATTGTCACCACCAGGGATAAGCGCATACTTAATTTACTTAAAGTTGACCGTGTATTTAGTATAGAGGAAATGGACACAAGCAAGTCCCTTGAGCTTTTCTGTTGGCATGCTTTCAGACAACCCAGTCCAATAGAAGACTTCCGTGAGCTCTCAAAGAACGTAGTTGCTTATTGTGGAGGATTACCGGTTGCTCTTGAAGTCCTTGGTTCTTCCTTATATGAGAGAACAGAAAAAGAATGGATAAGTGTACTGTCAAAACTAAAGAGAACTCCAAATGATCGAGTGCAAGAAAAATTGAGAATAAGTTATGATAGTTTGAAGGATGATATGACAAAGGATATATTTCTTGACATATGTTGTTTCTTTATCGGCAAGGATAAAGGCGATGTTACAGAGATATTAAATAACTATGGACTTTATGCTGATGTTGGCATAGCCATGCTCGTAGAGTGCAGCCTCCTAAAAGTTGAGAAGAATGACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGCGGAAGTTCACAAAAAGAACCTGGGAAGCGGAGTCGGTTGTGGCTTCACGAGGATGTACATGATGTTTTGACCACAAAATCTGGAACAGAAGCTATACAGGGATTGGTTTTGAAGTCGGAAAGAACTGGCAGAATTCGCTTCAGTACGGATTCTTTCAAGGAGATGAAGAAACTCAGACTTCTAGAACTTGATCGCGTTGACCTCACTGGAGATTATGGCAACCTTTCTAAAGAACTAAGATGGGTCCACTGGCAAGGATTTAGCTTGAACTATATACCTGATGAATTTTATCAAGGAAATCTAGTTGTTATCGACTTAAAATTCAGCAATATTAAAAAAGTTTGGAATAAAACCCAGGTGCTAGTGAATCTAAAAATTCTCAATCTCAGTCATTCGAGATACTTGAACAGAGGTCCGGACTTTTCAAAATTACCAAATCTTGAAAAGCTCATTATGATGGATTGTCCATCTTTGTCCAAAATACACCCATCCATTGGAGATCTCAATAATCTTCTTCTAATAAATTTGAAGGACTGTACAGGTCTTAGCCATCTTCCAAAGAAGATCTATCAACTGAAATCTTTGGAAACTCTCATCCTTTCTGGTTGTTCGAAGCTTGACAAGTTGGAAGAAGACATAGTGCAATTGGAATCCTTGACAACGCTGATTGCCAAAGGTACATCTGTAAAACATGTTCCCTATTCAATACTAAGATTGAAAAGCATTGGATATATATCCCTGTGTGGACATGAAGGATTATCACGCGAAATTTTTCCTTCTCTCATCTCGTCTTGGATGTCACCAACCATGAACTCTCTTCCCCAAATTTCCCCATTTAGGAACATTACATATTATCTAGCTTCTATCGCTGTACAGAAAAATAACCCTGGCTTTTTATCACCAACGGTTAGCAGCCTTTTACGACTGAGAACTTTTGGGGTACAATTCCGCTCAAAGATTGAACTTACTCAAGAATTACGAAGAATTCTTGATGATCAATATGATATTAGATTTACCAAAGTAGAAACATCACAATTCTCAAATCTATCCTTGAGATCACTTTTGATTGGAATGGGAAGTTTCCACAAAGTCATCGATACTCTAAGCAAGAGCATATTACAGGGATTAACAACCAAAGATTCGGGTGAATATTTCCTTCCCGGGGACAATTATCCTTCTTGGTTAGTCTATAAGGGTGAAGGACCTTCAGTAAAGTTTCAAGTGCCTGAGGATAGTGATTACTGTATGAAGGGAATAACTTTATGCGCTGTTTATTCATCAACATCTGAAAACATGGCAACTGAATGTCTCACAAGTGTTTCTATAATTAATTACAATAAATTCACTGTTCATATATACAAGCGAGATACAATAATGTCCTTTAATGATGAAGATTGGAAGAACGTAGCATCAAATCTAGGACCTGGTGACAATGTGGAGATATTTGTAGCTTTTGGGCATGGGTTGATTGTTAAGAAGGTAGCTGTCTATCTATTATATTACCAGTCAATTGATATGGATGTTTCTGCAAATGAGAAAGATGGTTTGATGAATGATGTTGGTCCTATGTTCAAAGGTGGTTTGTGGAGTTGTGATTATAAAAAAGATATGGATGAAACAAGTAAAAGATACCAGGAAATTCTGAATCAATCAGAGAATGCTGTTGAGATAGAGGTTTTGGGAAATGATGTTGACGTCAATAAAAGGTTGGCTTCTGCAGCCTTTCATGAATATGGACAGATTTATGATGTTATGGATGAGTTGGAAAAACTTAAGAACTCTGTTGAATGCATTAGATTTGAGCTCCTTGATGCACAGGAGAAACAAGAACAATATTGTGCTGCGCAAAGTTGGATAAGAAGTCTCGAAGATGTGCTTCATCTTGCAGATGACTTACTAGATGAGTTTATTATTGAAGGTATGAGATACAAAGTGAATGCAGGTGATAAGAAAAAGATGTCACGGGTATTTCGTTCATTATCTTCAAATCATACTTATCTTCGCCGAACACTGGTTCCTAAATTCAAAAAAATAAAAAAAATGTTTGATGATATGGTGGAAGAAATGGCTAAGTTGAATTTAGGCCCAAAAGCTGCGGTGGTTAAGCACACTGACAGCTTAAGGAACAAATCTGTTTCTTTTTTGTTAGAATCGGATATCATTGGAAGAGAAGATGAGAAAAAGGAAATTATAAATCTCTTGAGGCAACCACGTAGAAATATATCATCAATTGCTATTGTTGGTATGGGAGGTATAGGCAAGACAGCTCTTGCTCAGTTCGTATATAATGATGTGGAAGTGCAAAATCATTTTGAAAAAAAAATGTGGGTATGTGTATCTCCTAACTTTGATGTCAAGACTATTGTGAAGAAAATGTTGGAGTCATTAACCGATAGCAAAATTGATGATAAGTTATCCATTGAATACATACAACATAAACTTCATGAAAATTTAGCTGGTGAAAGATATTTGTTAGTCTTGGATAACATTTGGAATGCTAGTCATGAAAAATGGACTCAATTGAGAACTTATTTAATGTGTGGTGCTGAAGACAGTAAGGTTTTAATGACAACTCGTGATGGCAGTCTTGCAGAAAGACTGGAAGCAAGCGACCTCTATTTTTTGAGTGGTTTGACTCTAGATGTATCTTGGAGTATTTTAAAGAAAATGATATTTAGGAATGAAACCGATGGAGTGGATCAAAAACTTGAATCAATTGGTATACAAATAGCCGAAGAGTGCATGGGACATCCACTATTGATTCGAACACTGGGAGGCCTATTACAGAGTAAAAGTGAAGAAATGGAATGGATCGATGTCTTACGAGAAGTGTTTTTGGAATTAGGCGAACACAGAGAAAGCATCATACCCCACATCCTGAAAATGAGTTACCAAAGTTTGTCACCTCGGTTAAGACAATGTTTTGCTTATTGCTCTTTATTTCCCAAGGATTGGGAAATCGAGAAGGATCTATTGATTCAACTTTGGATGGCACAGGGTTATCTTCAATGCTCAGATGAAAAGGAAATCATGGAAGACACTGGTGAAGAATTTGTGAAGATTTTCTTGATGAGGTCATTTTTCCAAGATGTCAAAGTGGGCGAAGATGGTGAAATAGTTAGTTTCAAAATGCATGATTTAATGCATGACCTTGCAATAGCAGCAGCTGGCAATGATTGTTGTTACTTGGACAGTGAGACAAATAGCTGTGTACAAAGACCCATGCATGTATCGTTGGAGCCCAATGCAGTTCATTTGTTGGACTCATTTGATGGAAGCAGGTTGCGAACTTTGATTTTGCTGTCTTCCAATGAGGAAGAATTGAATGAGGATAAATTGTCAGTAATTTCAAAATTCAAACAGTTGCGTGTCTTAAAGCTGTCGAATTGTTCTTTAAGCAAGTCTTCTAGATCAATTGGAAAAATGAAACATTTAAGATATCTTAACTTGTCAAATTGTAGAGGACTGGGAAGTCTTTACAAATCCTTAAGCAGCCTTGTTTTGTTACAAACACTAACATTGACACCTAATGAAAAAGTGGAGCTTTTTACAAAGGTTGTATCAAAATTGATCAATTTGAGACACCTCCACATCTCTGATTGGGAAGCCTCCAGAGACAGGACACCATTTGGATTTGTACAATTGAGCATTTGGCAACATAAGAGGATGAATATTTCAAATTGGCTTTCTCCACTGACAAATATTGTTGAAATATCTTTCTTTTTGTGTGGAAGTCTCCAGTTTCTCCCACCGTTGGAGCGTCTCCCGTTCCTTAAGTCACTTCATATAGGTTTCCTTGAAGAACTGGAGTACATATATTATGAACAAGATTTTTCTTCAGTGTTCTTTCCATCTCTAAAGAGCCTCTCTTTGCAGTTTTGTTACAAGTTGAGGGGATGGAGGAAGATGGGAGATGATTTCAATAATACTAACTCTTCACAAAATCTCTCCTTGCCTACCTTTCCTCGTCTGTCTCAATTATCAATCATAGGATGTCTGAAGTTGACTTGCATGCCTGCCTTCCCAAGTCTTGAAAACGGATTGGAATGGTATGATAGTAGTGTGGAAACATTGGTAGCAACACTGAACAACGAAACATTGAATGGCTTCCCTGCTCTTTCCATGCTCAAATCCTTGCATATTGATGGAGTAAGCCTGGATGTGAAAAGTATCCCGAGTGATTGGATGAAAAACCTCACTTCTCTCCAGTTTCTTCATATTAATTGGTTTTCACCTCAAACGTTCCGGGATACAGAAGCTTGGTTTGAGAACAACTCCGAGTGTCTTCCTTGTCTACAAATAATTGGCTTTCATAATTGTGAAGAGATAGAGGTACTGCCTGATTGGATCTGCAACCTCTCATCGCTTCAGCATCTGAAGATGCATGATTGCATAAATTTGGCATCACTGCCCAATAGAATGTCCAGTCTAACCAACTTACAGACCCTAGAAATCATTGGATGTCCCCTCTTAGTTGAAGAATGCCAGAAACAAACGGGTGAAACTTGGGACAAAATTTGTGATACGCCTTTAAAACATATGTATGAGTGGAGGGGGAAAAAGGGAAATAGGGAGGAAGGAGTAAGAATTGAAAGGAGGGATGATGAAGTGGGAGGGAAAATAACTAATTACTTAGGGGGAAGTAAGAGAGTGGAGGAAGGGATTGAAGAAATCAGTGAACACACACAGAAGAGAATAAAGGGAAACCTGACGTATGGTGTGAGGCATTCTAGAAGCAATTTGGTGGCTGAGCAGTCAGACTCAGAGTCATTGTTATTATGA 6300 0.3819 MDSSSSSSLKFNDKWIYDVFVSYLGKDTGQNFVSHLQTALTIAGITTCINYRIGNGTELGPELSRAIGWSRISILVFSRNYTQSSWCLNELQKVMECHRTGDQAVVPVFYDVDPSVVRLQNGGFGKDLRATAKRISAKGKMEHVLSSWRKALTEAANLLGWDATKYRYKDELVQRIVEDVLRKLNRGLLNITKFPVGLHAHVQQVIQFIENQSSKVCLIGIWGMGGLGKTTTARAVYNQIHYKFDDLSFIENIREVCTKGDGEIIHLQEQPLSNVLETNEKIHTTYGISTTEKRFIGKKVLIVLDDVSTFGQVEALCGNRKCYGLGSVLIVTTRDKRILNLLKVDRVFSIEEMDTSKSLELFCWHAFRQPSPIEDFRELSKNVVAYCGGLPVALEVLGSSLYERTEKEWISVLSKLKRTPNDRVQEKLRISYDSLKDDMTKDIFLDICCFFIGKDKGDVTEILNNYGLYADVGIAMLVECSLLKVEKNDKLGMHDLIRDMGREIVRGSSQKEPGKRSRLWLHEDVHDVLTTKSGTEAIQGLVLKSERTGRIRFSTDSFKEMKKLRLLELDRVDLTGDYGNLSKELRWVHWQGFSLNYIPDEFYQGNLVVIDLKFSNIKKVWNKTQVLVNLKILNLSHSRYLNRGPDFSKLPNLEKLIMMDCPSLSKIHPSIGDLNNLLLINLKDCTGLSHLPKKIYQLKSLETLILSGCSKLDKLEEDIVQLESLTTLIAKGTSVKHVPYSILRLKSIGYISLCGHEGLSREIFPSLISSWMSPTMNSLPQISPFRNITYYLASIAVQKNNPGFLSPTVSSLLRLRTFGVQFRSKIELTQELRRILDDQYDIRFTKVETSQFSNLSLRSLLIGMGSFHKVIDTLSKSILQGLTTKDSGEYFLPGDNYPSWLVYKGEGPSVKFQVPEDSDYCMKGITLCAVYSSTSENMATECLTSVSIINYNKFTVHIYKRDTIMSFNDEDWKNVASNLGPGDNVEIFVAFGHGLIVKKVAVYLLYYQSIDMDVSANEKDGLMNDVGPMFKGGLWSCDYKKDMDETSKRYQEILNQSENAVEIEVLGNDVDVNKRLASAAFHEYGQIYDVMDELEKLKNSVECIRFELLDAQEKQEQYCAAQSWIRSLEDVLHLADDLLDEFIIEGMRYKVNAGDKKKMSRVFRSLSSNHTYLRRTLVPKFKKIKKMFDDMVEEMAKLNLGPKAAVVKHTDSLRNKSVSFLLESDIIGREDEKKEIINLLRQPRRNISSIAIVGMGGIGKTALAQFVYNDVEVQNHFEKKMWVCVSPNFDVKTIVKKMLESLTDSKIDDKLSIEYIQHKLHENLAGERYLLVLDNIWNASHEKWTQLRTYLMCGAEDSKVLMTTRDGSLAERLEASDLYFLSGLTLDVSWSILKKMIFRNETDGVDQKLESIGIQIAEECMGHPLLIRTLGGLLQSKSEEMEWIDVLREVFLELGEHRESIIPHILKMSYQSLSPRLRQCFAYCSLFPKDWEIEKDLLIQLWMAQGYLQCSDEKEIMEDTGEEFVKIFLMRSFFQDVKVGEDGEIVSFKMHDLMHDLAIAAAGNDCCYLDSETNSCVQRPMHVSLEPNAVHLLDSFDGSRLRTLILLSSNEEELNEDKLSVISKFKQLRVLKLSNCSLSKSSRSIGKMKHLRYLNLSNCRGLGSLYKSLSSLVLLQTLTLTPNEKVELFTKVVSKLINLRHLHISDWEASRDRTPFGFVQLSIWQHKRMNISNWLSPLTNIVEISFFLCGSLQFLPPLERLPFLKSLHIGFLEELEYIYYEQDFSSVFFPSLKSLSLQFCYKLRGWRKMGDDFNNTNSSQNLSLPTFPRLSQLSIIGCLKLTCMPAFPSLENGLEWYDSSVETLVATLNNETLNGFPALSMLKSLHIDGVSLDVKSIPSDWMKNLTSLQFLHINWFSPQTFRDTEAWFENNSECLPCLQIIGFHNCEEIEVLPDWICNLSSLQHLKMHDCINLASLPNRMSSLTNLQTLEIIGCPLLVEECQKQTGETWDKICDTPLKHMYEWRGKKGNREEGVRIERRDDEVGGKITNYLGGSKRVEEGIEEISEHTQKRIKGNLTYGVRHSRSNLVAEQSDSESLLL 2099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03933 2099 Gene3D - 1470 1560 IPR036388 -
Vivi7g03933 2099 PRINTS Disease resistance protein signature 696 712 - -
Vivi7g03933 2099 PRINTS Disease resistance protein signature 294 308 - -
Vivi7g03933 2099 PRINTS Disease resistance protein signature 387 401 - -
Vivi7g03933 2099 PRINTS Disease resistance protein signature 218 233 - -
Vivi7g03933 2099 FunFam Disease resistance protein (TIR-NBS-LRR class) 354 436 - -
Vivi7g03933 2099 Pfam Rx N-terminal domain 1074 1155 IPR041118 -
Vivi7g03933 2099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 447 IPR027417 -
Vivi7g03933 2099 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 161 IPR035897 -
Vivi7g03933 2099 ProSiteProfiles TIR domain profile. 15 184 IPR000157 GO:0007165
Vivi7g03933 2099 Coils Coil 1094 1114 - -
Vivi7g03933 2099 SMART till_3 16 158 IPR000157 GO:0007165
Vivi7g03933 2099 Gene3D - 1071 1177 - -
Vivi7g03933 2099 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1168 1987 IPR044974 GO:0006952
Vivi7g03933 2099 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 186 - -
Vivi7g03933 2099 Gene3D - 186 347 IPR027417 -
Vivi7g03933 2099 Gene3D - 1208 1377 IPR027417 -
Vivi7g03933 2099 Gene3D - 14 185 IPR035897 -
Vivi7g03933 2099 FunFam Probable disease resistance protein At1g61300 1208 1377 - -
Vivi7g03933 2099 FunFam Probable disease resistance protein At1g63360 1470 1560 - -
Vivi7g03933 2099 SUPERFAMILY L domain-like 507 858 - -
Vivi7g03933 2099 Gene3D Ribonuclease Inhibitor 483 851 IPR032675 -
Vivi7g03933 2099 Pfam TIR domain 17 188 IPR000157 GO:0007165
Vivi7g03933 2099 Pfam NB-ARC domain 1230 1456 IPR002182 GO:0043531
Vivi7g03933 2099 Pfam NB-ARC domain 200 436 IPR002182 GO:0043531
Vivi7g03933 2099 SUPERFAMILY L domain-like 1549 2001 - -
Vivi7g03933 2099 Gene3D - 353 436 IPR042197 -
Vivi7g03933 2099 Gene3D - 1384 1469 IPR042197 -
Vivi7g03933 2099 Gene3D Ribonuclease Inhibitor 1852 2009 IPR032675 -
Vivi7g03933 2099 Gene3D Ribonuclease Inhibitor 1583 1851 IPR032675 -
Vivi7g03933 2099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1212 1484 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03933 Vivi-Chr7 105302696 105311894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03933 10 745 WRKY Transcription Factor Family AT4G12020 30.251 1.27e-74 275