Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03929 ATGCCTTCTTCATCCTCCTCCTCCGCTCCTCAATTCGTCTACGACGTCTTCCTCAACTTCAGAGGCAAAGACGTTCGTCGTAGCTTCGTTTCTCAGCTCCACAAATCCCTCACTGATGCCGGAATCCACACTTTTCTCGACGACGAGAGCCTCGAAAAGGGAACGGATCTTGAACCAGAACTAATGCGAGCAATTGAAGCTTCTCGTATTTGCATAGTGGTTTTCACCAGAGCTTATATCACATCTACTTGGTGTCTTAAAGAGCTTGTTCATATTATGAACTGCTGTAAAACTACTGGACAGATTGTTCTGCCTATATTTTACCATGTTGAAGCGTCCGAGGTGCGTCATCAGAACGACGGTTATAGAAGAGCTTTGCAAGCAACTGCAAAAAGAAGAAGCTCTGGAGGGGAAAGAATGGAGCATATGTTATCCAAATGGACCACTGCTCTAAACGAAGCTGGAACTATAATTGGATGGGATTTCCAAAATTTCAGGAATGAAGTTGAGTTAATTTCTGAAATAGTTCAAGATGTTTCCAGAAAGCTAAAAAGTAGATTATTGAAAATTACCGAGTTTCCAGTTGGATTGGATACCCGTGTGCAACAAATGATTCACTTTATTGAAAAGCATTCAACCAAAGTTTGCTTGATAGGGATCTGGGGTATGGCTGGTTCTGGTAAAACAACAACTGCCAGAGCTATCTACAACAATTTTAATCACAAATTTTTAAAACACTGTTTCATTGGAGATATTCGACAAGTTTGTGAAAGAGGTGATGGAGAGATTAATCATTTACAAGAACAGCTTCTTTCAAGTGTTTCGAAAACAAATGAAAAGATACATAACACTCCAGACGGGATAGCCACAATTGAGAAAAGATTTATTGGAAAAAAGGCACTCGTTGTACTCGATGATGTGAGCACATTTGAGCAAGTAGAAGCCCTATGCGGAAACAGTAAATGTTTTGGTTCGGGAACTGTATTGATTGTTACATCCAGGGATTTGCGTATACTTAAGTTACTTGAAGTCGACCGTATCTATAGTATAAAGGAAATGGACGAAAGCAAGTCTCTTGAGCTTTTCTGTTGGCATGTTTTCAGGAAACCAAATCCAAAAGACGAATTCGTTGAACTCTCAAAAAGTATAGTTGCTTACTGTGGAGGATTACCACTGGCTCTAGAAGTTATTGGATCTTACTTGCGTGGCAGGCCAGAACAATTTTGGGAATATGTACTATCACAATTAGAGAGAATTCCAAATGATAAAGTGCAGGACAAACTCCAAATAAGCTATGAAGGTTTAGAGGATGATCTTCAAAAGGATATATTTCTTGACATTTGTTGTTTCTTTATTGGGAAGGATAGGGCCCATGTTTCAGAGATTCTAGATGGCTGTGGACCTTATTCTGATGTTGGAATAACTGTCCTCATAGAGCGCAGCCTTCTAAAAGTCGAAAAGAATAACAAGCTTGGAATGCATGGTTTGCTACGAGACATGGGAAGAGAGATTGTTCGTAAAGAATCAAAGAAAGAGCCTGAGAAACGTAGTCGATTGTGGCTTCACAAGGATGCACATAAAGTATTGACAGATAATAGTGGAACAAAAACGGTGGAAGGATTGGTTATGAATTCCCAAAGCACCAACAAAAACGGTGGAACAAAAACGGTGGAAGGATTGGTTATGAATTCCCAAAGCACCAACAATGTTTGCTTCGAAACTGATACATTCAAGGAGATGAAGAATTTGAGACTTTTACAACTTCATGGCGTTGATCTTATCGGAGATTTTAAGCATCTTTCTCAAGAACTGAGATGGCTCCATTGGCAGGGATTTACTGGTGAATGTATACCTGGTGACTTTAATCTGGGAAATCTAGTTGCTTTTGAGTTAAAGCGCAGCAATATTAAACAAGTTTGGAATGAAACAAAGCTGATGGAGAAGCTGAAAATTCTCAATCTGAGTCATTCCAAGTACTTGACAAGCACTCCAGACTTTTCGAAATTGCCAAATCTAGAAAAGCTCATTATGAAAGACTGTCCAAGCTTGTCTGTGGTACACCAGTCCATTGGGGATCTGAGGAATATTCTTCTGATAAATTTTAAAGATTGTACAAGTCTTAGCAATCTCCCAGAGACGATAAATCAATTGAAGTCTTTGAAAACTCTCATCCTTTCCGGTTGTTCAAAGATTGACAAGGTTGAAGAAAGCATAGTGCAGATGGAATCCTTGACAACACTGGTCATAAAAGATACAGGTGTGAAAGAGGAGATGTATTCAGTAGTACGATCAAAAAGCATCGGATATATCTCTCTTTGTGGATATGAAGGATTATCATTTGATGTTTTTCCTTCTGTTATTTGGTCTTGGATGTCACCAACAATGGCTTTGTCTTTAGCTTCCATCAATGTACAGAACAATAACTCGGGCTTTCTAACACCAATTGTTAGGAGCCTTTCACAACTCAGAACTGTTTGGATACAATGCCACTCAAAGGTTCAACTAGCCCAAGAATTACAAAGAATTCTTGTTGATCAACATGATATTAATCGTACAGACTTGGAAGACTCGCTCGTCTCAAATCTTTCCTTGAAATCACATTTGATTGGAATGGGAAGTTGCCACACAGTCATGGATACTCTTTGCAAGCGCATACCACAGGGATCAACAACCAATGATTCGAGCAATTTTTTCCTTCCGGGTGGAAATTATCCTTCTTGGTTAGCCTATACAAACGATGGACCTTCGGCACCATTTCATATTCCTAAGGATATTAATTGTCTCATGGAGGGAATAGTCTTGCGTGTTGTTTACTCGTCAACATCTGAAACCATGGCAGTTGAATGTCTTACTAGTGTCTTGATCATTAATAACACAAAGTGCACCATCCATATATACAAGCGAGACACAGTGGTGTCCTTTATTGATGAAGATTGGAAGAATGTAATATCAAATCTAGAACCTGGTGACGATGTCGAGATTTATGTGGTTTTTGGGCATGGATTGATTGTTAAGAAGACAACTGTTTGTCTAATATATGGCCAGTCAGTTATTATGGAAGTTGATTCATCAATTAAGATGGAATTGAACGTGCTGCCGCAGCCGTTACCTGAAGTGAACATGCAAACATCGTCTAATGGGACAGTACCAAAGGCCAATAAAAGTTTATTTTCAGGATTTGGAAAAAAAATGGGTGCATGTTTATGCCTGAACCAGCAAAGAGATAAAGATTTGAACAATTTTTGA 3246 0.3906 MPSSSSSSAPQFVYDVFLNFRGKDVRRSFVSQLHKSLTDAGIHTFLDDESLEKGTDLEPELMRAIEASRICIVVFTRAYITSTWCLKELVHIMNCCKTTGQIVLPIFYHVEASEVRHQNDGYRRALQATAKRRSSGGERMEHMLSKWTTALNEAGTIIGWDFQNFRNEVELISEIVQDVSRKLKSRLLKITEFPVGLDTRVQQMIHFIEKHSTKVCLIGIWGMAGSGKTTTARAIYNNFNHKFLKHCFIGDIRQVCERGDGEINHLQEQLLSSVSKTNEKIHNTPDGIATIEKRFIGKKALVVLDDVSTFEQVEALCGNSKCFGSGTVLIVTSRDLRILKLLEVDRIYSIKEMDESKSLELFCWHVFRKPNPKDEFVELSKSIVAYCGGLPLALEVIGSYLRGRPEQFWEYVLSQLERIPNDKVQDKLQISYEGLEDDLQKDIFLDICCFFIGKDRAHVSEILDGCGPYSDVGITVLIERSLLKVEKNNKLGMHGLLRDMGREIVRKESKKEPEKRSRLWLHKDAHKVLTDNSGTKTVEGLVMNSQSTNKNGGTKTVEGLVMNSQSTNNVCFETDTFKEMKNLRLLQLHGVDLIGDFKHLSQELRWLHWQGFTGECIPGDFNLGNLVAFELKRSNIKQVWNETKLMEKLKILNLSHSKYLTSTPDFSKLPNLEKLIMKDCPSLSVVHQSIGDLRNILLINFKDCTSLSNLPETINQLKSLKTLILSGCSKIDKVEESIVQMESLTTLVIKDTGVKEEMYSVVRSKSIGYISLCGYEGLSFDVFPSVIWSWMSPTMALSLASINVQNNNSGFLTPIVRSLSQLRTVWIQCHSKVQLAQELQRILVDQHDINRTDLEDSLVSNLSLKSHLIGMGSCHTVMDTLCKRIPQGSTTNDSSNFFLPGGNYPSWLAYTNDGPSAPFHIPKDINCLMEGIVLRVVYSSTSETMAVECLTSVLIINNTKCTIHIYKRDTVVSFIDEDWKNVISNLEPGDDVEIYVVFGHGLIVKKTTVCLIYGQSVIMEVDSSIKMELNVLPQPLPEVNMQTSSNGTVPKANKSLFSGFGKKMGACLCLNQQRDKDLNNF 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03929 1081 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Vivi7g03929 1081 Gene3D - 352 436 IPR042197 -
Vivi7g03929 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 447 IPR027417 -
Vivi7g03929 1081 Gene3D Ribonuclease Inhibitor 547 879 IPR032675 -
Vivi7g03929 1081 SMART till_3 13 157 IPR000157 GO:0007165
Vivi7g03929 1081 Pfam NB-ARC domain 201 427 IPR002182 GO:0043531
Vivi7g03929 1081 SUPERFAMILY L domain-like 570 830 - -
Vivi7g03929 1081 Gene3D - 13 184 IPR035897 -
Vivi7g03929 1081 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 185 - -
Vivi7g03929 1081 Gene3D - 185 347 IPR027417 -
Vivi7g03929 1081 PRINTS Disease resistance protein signature 715 731 - -
Vivi7g03929 1081 PRINTS Disease resistance protein signature 217 232 - -
Vivi7g03929 1081 PRINTS Disease resistance protein signature 294 308 - -
Vivi7g03929 1081 PRINTS Disease resistance protein signature 387 401 - -
Vivi7g03929 1081 Pfam TIR domain 14 187 IPR000157 GO:0007165
Vivi7g03929 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 160 IPR035897 -
Vivi7g03929 1081 ProSiteProfiles TIR domain profile. 12 183 IPR000157 GO:0007165
Vivi7g03929 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 825 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03929 Vivi-Chr7 105267527 105272875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03929 14 736 WRKY Transcription Factor Family AT4G12020 30.417 3.55e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03929 - - vvo:131616214 2144.01