Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03928 ATGTCTCATCTTCCTTTTGTCGCCCCTCCTTCCTCTCCAAGTTCCGGATCCCAATGGATCTACGACGTTTTCATCAATTTCAGAGGAAAAGACACTCGTGCCAATTTCGTTTCTCACCTCTATGCAGCACTCTCAAACACTGGAATCAACGCTTTTCTTGACGACCACAATCTTCAAAAGGGAAAGAAACTTAGACCAGAATTAGTGCGAGCAATTCAAGGCTCTCAGATATCCATCGTTGTTTTCTCCCAAAACTACGTTGATTCTAATTGGTGTCTTGATGAACTCGAACTAATCATGCAATGCCACGCTATGGGTCATCAGCTTGTTATGCCTGTATTTTGCGGTATTACCCCTTCGGATATACGTCAATATGCTGACAAAACTGTTGCACAACCTTCCAATAGCCTCCCACATGATTTGGTATCTCCCTTTTATGATTCACGAAATAAAGCACTCACTGATGCTTCTCATTTGGCTGGTTGGGATATGAAGAATTATAGTAATGAAAGCATTGTTGTGAAGGAAATTGTGGCCCATGTTTTGAGAAAACTAGACAAAAGATACTTACCTGTCCCAGATTTTCCAGTTGGGCTAGAATCCCGTGCGGAACAGTTGATTCGGTTTTTAAGACAGAATACAAGAGGAGTTTGTTTAGCAGGGATTTGGGGAATGGGAGGGATTGGGAAAAGCACCATTGCTAAAGTTGTCTACAATAAACTCTATTCTGAATTTGAAGATCAGAGCTTCCTTGCTAGTATTAGAGAAGTTTGGGAGAGAGATAGGGGGCGAATCGATTTACAAGAACAACTTCTTTCAGATATCCTCAAAACAAGAAATATAAAGGTGCATAATGTTGAGTGGGGAAAAGCTATGATCAATGAAAGACTTTGCACGAAACAAGTGCTTGTTGTACTCGATGATGTGAGTACGCGTGAGCAATTAAATGCATTATGTGGAAGTCGAAATGGGATTGGTCCGGGAAGTATAATAATCATCACAACAAGAGATGTGCGTCTACTTGATTTTCTTGGAGTTGACTTTATTTATGAAGCGGAAGGATTGAATGCACGGGAGTCCCTTGAGCTTTTCAGTCGGCATGCGTTTAGGGAGGCGAGTCCAACTGAAGGTTTCTTTAGTCTCTCAGGAGATGTAGTTTCCTATTGTGGTGGACTACCATTAGCTCTTGAAGTCCTTGGATCTTATTTGTTCAAGAGGAGAAAACAAGACTGGAAAAGTGTATTATCAAAGCTAGAAAAGATTCCCAATGATGAAATACATGAGAAACTAAAAATAAGCTTCGATGGTTTAGAGGATCGCATGGAAAAGGATATATTTCTTGATGTGTGTTGTTTCTTTATCGATAAGGACAAAGCTTATGTTACAGAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATAACAGTGCTGATAGAAAGAAGCCTCATAAAAGTTGAAAAGAATAATAAGCTTGGCATGCATTCTTTGCTACGAGACATGGGTAGAGAAATTGTCCGTGAAAGTTCACCTGAAGAGCCTGAGAAGCGTAGTCGATTGTGGTGTCATGAGGATGTAGTTGATGTATTGACTGACCATACCGGAACAAAAGCCATTGAAGGATTGGTTATAAAGTTGCAAATGACCAGTAGCCTTTGCTTCGATACTATTGCTTTTGAGAAAATGAAGAGATTGAGATTGTTGCAACTTGATCATGTGCAACTCATTGGAGATTATGAGTGTTTTCCGAAGCACCTGAGATGGCTTTCTTGGCAAGGGTTTCCTTTAAAATACACGCCAGAAAACTTTAATCAGAAAAATCTAGTTGCTATGGACTTAAAACACAGTAATCTCACCCAAGTTTGGAAGAAGCCTCAGTTGTTGCAGAAGCTAAAAATTATCAATCTCAGTCATTCTAAGTACTTAAAAAGAACCCCTGACTTTTCAAACTTGCCGAACCTAGAAAATCTCATTATGAAGGATTGTCGAAATTTATCCAAGGTGCACTCATCCATTGGAGATCTCAAGAATCTTCTTTTGATAAACTTGAAGGACTGTACAAGCCTTAGCAATCTCCCCAGAGAGATATATCAACTGACATCAGTGAAAACTCTCATCCTTTCCGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACGTGGGGCAGATGGAATCCTTGACAACACTGATTGCAAAAGATACATCCGTAAAAGAAGTTCCCCATTCAATACTACGATTAAAAAGTATTGGATTTATATCCCTATGTGGATACAAAGGATTATCACGTGATGTTTTTCCATCCCTCATTAGGTCTTGGATGTCACCAACAATGGATTCCTTAACTCACGTTCCTCCTTTTGGTGGCTTGTCAATGTCTCTTATTTCCCTGAACTTAGAGACTAGTAATTTGGGTTTGGTCTATCAATCAGAAATACTTAGCAGCTGTTCAAAACTAAGAAGTTTTTCTGTACAATTTGATTCAGAGGTTCAACTGAAAGAAGAATTCCGAAAACTTCTTGATGATCTATATGGTGCAGGTCTTACTGAACTGGGAACATCACATGCATCACAAATTTCAGATCTTTCCTTGAGATCTGTTTTGATTGGAATCGGAAGCTGCCACATTGTCATGGATACTCTTGAGAAGAGCTTATCACAGGGATTAGCAACCGATTCTAGTGATTCGTTCCTTCCAAGTGACAATTATCCTTTTTGGTTAACGTATAAAGGTGAAGGATCTTCGGTACTTTTTCAAGTGCCTGGGGATAGTGGTGGTTGTTGCATGAAAGGAATAACTTTGTGTGTTCTTTATTCATCAACACCTGAAAACTTGGGAACCGAATGTCTCATTAGTGTCTTGATCATTAATTACACAAACTTCACTATCCATATTTACAAACAAGACACCGTTATGTCGTTTAATGATGAAGATTGGCAAAGCATGGTATTAAATTTAGGAGTTGGTGACAATGTGGAGATTGTTATAGCTATTGGGAATGGATTGATTGTTAAGGAGACAACTGTGTATCTAATATATGATCCTTCAAATGGTATTGAAATTGAGCCATCAAATATTATGGAGGTGGACCCATTGACCGACACAAAAATAGAGTCATTACAAGAAGTGGAAGTGCAACCATCACCTAATGCGAGAACGGGGCCATCAGCTGAAGTGGCACTACAACCATCACCTAAAATAAAAATGGAACCATTACCGAAAACAAATAGAAAAATCTTTACAAAACTTGCAAAGAAAGTGGGAGAATGTTTATGCTTGAACCAGAATTGA 3291 0.3902 MSHLPFVAPPSSPSSGSQWIYDVFINFRGKDTRANFVSHLYAALSNTGINAFLDDHNLQKGKKLRPELVRAIQGSQISIVVFSQNYVDSNWCLDELELIMQCHAMGHQLVMPVFCGITPSDIRQYADKTVAQPSNSLPHDLVSPFYDSRNKALTDASHLAGWDMKNYSNESIVVKEIVAHVLRKLDKRYLPVPDFPVGLESRAEQLIRFLRQNTRGVCLAGIWGMGGIGKSTIAKVVYNKLYSEFEDQSFLASIREVWERDRGRIDLQEQLLSDILKTRNIKVHNVEWGKAMINERLCTKQVLVVLDDVSTREQLNALCGSRNGIGPGSIIIITTRDVRLLDFLGVDFIYEAEGLNARESLELFSRHAFREASPTEGFFSLSGDVVSYCGGLPLALEVLGSYLFKRRKQDWKSVLSKLEKIPNDEIHEKLKISFDGLEDRMEKDIFLDVCCFFIDKDKAYVTEILNGCGLHADIGITVLIERSLIKVEKNNKLGMHSLLRDMGREIVRESSPEEPEKRSRLWCHEDVVDVLTDHTGTKAIEGLVIKLQMTSSLCFDTIAFEKMKRLRLLQLDHVQLIGDYECFPKHLRWLSWQGFPLKYTPENFNQKNLVAMDLKHSNLTQVWKKPQLLQKLKIINLSHSKYLKRTPDFSNLPNLENLIMKDCRNLSKVHSSIGDLKNLLLINLKDCTSLSNLPREIYQLTSVKTLILSGCSKIDKLEEDVGQMESLTTLIAKDTSVKEVPHSILRLKSIGFISLCGYKGLSRDVFPSLIRSWMSPTMDSLTHVPPFGGLSMSLISLNLETSNLGLVYQSEILSSCSKLRSFSVQFDSEVQLKEEFRKLLDDLYGAGLTELGTSHASQISDLSLRSVLIGIGSCHIVMDTLEKSLSQGLATDSSDSFLPSDNYPFWLTYKGEGSSVLFQVPGDSGGCCMKGITLCVLYSSTPENLGTECLISVLIINYTNFTIHIYKQDTVMSFNDEDWQSMVLNLGVGDNVEIVIAIGNGLIVKETTVYLIYDPSNGIEIEPSNIMEVDPLTDTKIESLQEVEVQPSPNARTGPSAEVALQPSPKIKMEPLPKTNRKIFTKLAKKVGECLCLNQN 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03928 1096 Gene3D Ribonuclease Inhibitor 540 869 IPR032675 -
Vivi7g03928 1096 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Vivi7g03928 1096 Gene3D - 354 438 IPR042197 -
Vivi7g03928 1096 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 746 IPR044974 GO:0006952
Vivi7g03928 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Vivi7g03928 1096 Pfam NB-ARC domain 201 423 IPR002182 GO:0043531
Vivi7g03928 1096 Gene3D - 189 345 IPR027417 -
Vivi7g03928 1096 Pfam TIR domain 21 186 IPR000157 GO:0007165
Vivi7g03928 1096 SMART till_3 20 159 IPR000157 GO:0007165
Vivi7g03928 1096 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 126 IPR035897 -
Vivi7g03928 1096 SUPERFAMILY L domain-like 495 825 - -
Vivi7g03928 1096 Gene3D - 15 188 IPR035897 -
Vivi7g03928 1096 PRINTS Disease resistance protein signature 296 310 - -
Vivi7g03928 1096 PRINTS Disease resistance protein signature 389 403 - -
Vivi7g03928 1096 PRINTS Disease resistance protein signature 627 643 - -
Vivi7g03928 1096 PRINTS Disease resistance protein signature 219 234 - -
Vivi7g03928 1096 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03928 Vivi-Chr7 105250136 105256270 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03928 13 747 WRKY Transcription Factor Family AT4G12020 30.840 3.09e-82 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03928 - - vvo:131619861 1599.72