Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03925 ATGGATTATATACACGACGTGTTCATCAACTTTAGAGGGAAAGACACACGTCAGAGTTTCGTTTCACATCTCAATGCCGGCCTCACAAATGCAGGAATCAAGACCTACATCGACAACCAGCTTCACAAAGGAACCGAGCTTGGACCAGAACTGTCACGAGCAATAAAAAGCTCCCGTATATCTATACTTATTTTCTCCAAAAACTACACTGAGTCTAGTTGGTGTCTTAATGAACTTCAAAAAGTCATTGAATGCCACTTAACTCGTGCCCAAATTGTTGTTCCTTTTTGGACAAGCTTTGAGAGCTACTGGAAACTAACATTTGAACAGTTAAAATCACTATGTGGGAATCCTAAATTGTTTTGTCCGGGAAGTGTATTAATCGTTACAACCAGAGATATACGCCTACTTAATTTATTTAAGGTTGATTACGTGGGTACAATGAAGGAGATGGACGAAAATGAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTAGGCAACCTGTTCCGATAAAAGACTTCCATGAACTCTCAAGGAACGTAGTTGCTTATTGTGGAGGATTACCAATTGCTCTTGAAGTCCTTGGTTCTTACTTGTATGAGAGGACAGAAGAAGAAGAATGGATAAGCGTCCTCTCAAAACTAAAGAGGATTCCCAATGATCAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTAAAAGATGATATGGCAAAGGATATATTTCTTGACATATGCTGTTTCTTTGTTGGCAAGGGCAGAGCCGATGTTACAAAGATCCTAAATGGCTGTGGACTTTATGCAGATATTGGAATAGCTGTTCTCGTAGAGCGGAGCCTTGTAAAAATTGAAAAGAATAACAAGCTTGGAATGCACGGTTTAATAAGAGACATGGGAAGAGAGATTGTTCGAGAAAGTTCAACAAAAGAGCCTGGAAAGCGTAGTAGATTGTGGTTTCGTGAGGATGTTCATGATGTTTTGACAAAAAATACTGGAATAGAAACTGTAGAAGGATTGGTTTTGAAGGTGCAAAGAACCAGTAGAGTTGTCTTAAGTACTGATTCTTTCAAGGAGATGAAGAAACTGAGACTTTTACAACTTGATCATGCCATCCTCATTGGAGATTATCGGTATCTTTCAAAAGAACTGAGATGGATTCATTGGCAAGGATTTACCTTCAACTATATACCCGATGATTTTTATCAGGGAAGTCTAGTTGCTATTGATGTAAAATACAGCAGTATGAAACAAGTGTGGAATGAAACCAAGTTGTTGGATAAACTGAAAATTCTCAATGTTAGTCATTCTAAGTACTTGAAAAGCACTCCTGACTTTTCAAAAGTACCGAATCTAGAAAAGCTCATTATGAAGAATTGTCCAAATTTGTCCGAGATACACAAGTCTATTGGAGATCTTAGGAATCTACTTATGTTGAATTTGAAGGACTGTACAAGTCTTGGCAATCTCCCAAAGAAGATCTATCAATTGAAATCATTGAAAACTCTTACACTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACATTGTGCAGATGGAATCCTTGACAACACTGAACGCAAAAGATACATCAGTGACTGAAGTTCCGCGTTCAATATTAAGATTAAAAAGCATTGGATTTATATCCCTATGTGGATATGAAGGTTTATCACGTGATGTGTTTCCTCGTCTCATTTGGTCTTGGATGACGCCAGCCATGAATTCCCTACCCTGTATATCTCCATTTGGGGACAGTTCTTTGTCACTAGTTTCCTTGGATGTATCAAGTAATAGTATGGGCTATCAACCGCCAATGCTTAGAAACCTTTCAAAACATAGAAGTGTTTGGATTCAATGCCGGTCAGTGATGCAACTGACTCAAGAATTAAGAAATTTTTTAGATGATCTATATGATGTAAGTTTTACCAAGTTGGAAACAGCATCACATGCATCACTTATCTTAGACATTTCGTTGAAATCGCTTTTGATTGAGATGGGAAATTGTGACATGGTCATCAACACTCTTGGCAAGAGCATATCACAGGGATTTACAACCAATGATTCAAGCAATTTTTGCCTTCCAGATGACAATTATCCTTCTTGGTTAGCCTATACATGTGAAGGACCTTCAGTACTATTTCAAGTTCCTGAGAATAATCTTTGTCACATAAAGGGAATAGTTTTACGTGTTGTTTATTCATCAACATCTGAAAACACGGCAACTGAATATCTTACTAATGTCTTGATCATAAACTACACAAAATGCACTATCCAAATATACAAGGGAGACACAGTCATGTCTTTTAACAATGAAGATTGGAAGGGTTTAACATCAAATCTAGGACCTGGTGACAATGTGGAGATTTTGGTAGCTTTTAGGCATGGATTGATGGTTAAGGAGACTGTTTTATATCTAATATATAACCATTCAGTTACTGTGGAAACTAGTTCATCAATCAACGTGGAAACGAAGATATCGCCGGAAGTGAACTTGCAGCCATCATCCATTCTGAATATGGAGCCATTACTTGATATGAAAACCGAACCATCACGGAATCCAAATGAGAAAATATTTTCAAGACTTGCAAAGAGAATGGGAAAATGTTTGTGCATAAACCAAAATAGAGGTCTCTAA 2640 0.3754 MDYIHDVFINFRGKDTRQSFVSHLNAGLTNAGIKTYIDNQLHKGTELGPELSRAIKSSRISILIFSKNYTESSWCLNELQKVIECHLTRAQIVVPFWTSFESYWKLTFEQLKSLCGNPKLFCPGSVLIVTTRDIRLLNLFKVDYVGTMKEMDENESLELFSWHAFRQPVPIKDFHELSRNVVAYCGGLPIALEVLGSYLYERTEEEEWISVLSKLKRIPNDQVQEKLRISYDGLKDDMAKDIFLDICCFFVGKGRADVTKILNGCGLYADIGIAVLVERSLVKIEKNNKLGMHGLIRDMGREIVRESSTKEPGKRSRLWFREDVHDVLTKNTGIETVEGLVLKVQRTSRVVLSTDSFKEMKKLRLLQLDHAILIGDYRYLSKELRWIHWQGFTFNYIPDDFYQGSLVAIDVKYSSMKQVWNETKLLDKLKILNVSHSKYLKSTPDFSKVPNLEKLIMKNCPNLSEIHKSIGDLRNLLMLNLKDCTSLGNLPKKIYQLKSLKTLTLSGCSKIDKLEEDIVQMESLTTLNAKDTSVTEVPRSILRLKSIGFISLCGYEGLSRDVFPRLIWSWMTPAMNSLPCISPFGDSSLSLVSLDVSSNSMGYQPPMLRNLSKHRSVWIQCRSVMQLTQELRNFLDDLYDVSFTKLETASHASLILDISLKSLLIEMGNCDMVINTLGKSISQGFTTNDSSNFCLPDDNYPSWLAYTCEGPSVLFQVPENNLCHIKGIVLRVVYSSTSENTATEYLTNVLIINYTKCTIQIYKGDTVMSFNNEDWKGLTSNLGPGDNVEILVAFRHGLMVKETVLYLIYNHSVTVETSSSINVETKISPEVNLQPSSILNMEPLLDMKTEPSRNPNEKIFSRLAKRMGKCLCINQNRGL 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03925 879 Gene3D - 1 104 IPR035897 -
Vivi7g03925 879 Gene3D - 150 235 IPR042197 -
Vivi7g03925 879 Gene3D Ribonuclease Inhibitor 324 681 IPR032675 -
Vivi7g03925 879 Pfam TIR domain 5 95 IPR000157 GO:0007165
Vivi7g03925 879 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 96 IPR044974 GO:0006952
Vivi7g03925 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 246 IPR027417 -
Vivi7g03925 879 SUPERFAMILY "Winged helix" DNA-binding domain 222 328 IPR036390 -
Vivi7g03925 879 SMART till_3 4 137 IPR000157 GO:0007165
Vivi7g03925 879 ProSiteProfiles TIR domain profile. 3 148 IPR000157 GO:0007165
Vivi7g03925 879 Pfam NB-ARC domain 125 224 IPR002182 GO:0043531
Vivi7g03925 879 PRINTS Disease resistance protein signature 185 199 - -
Vivi7g03925 879 PRINTS Disease resistance protein signature 495 511 - -
Vivi7g03925 879 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 101 IPR035897 -
Vivi7g03925 879 SUPERFAMILY L domain-like 342 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03925 Vivi-Chr7 105234411 105237660 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03925 440 552 WRKY Transcription Factor Family AT5G45050 30.973 4.48e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03925 - - vvo:131619920 1751.49