Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03923 ATGGTTGAGCAAATTCCATATGGTGTTGCTACTAGCCTCATTAACAGGTTGGCTTCGGCGGCCTTTCATGAATTTGGAAGGATTTATGGTGTTATGGATGAATTGGAAAGGCTGAAGAATACTGTTGAGGCCATCAGAGCTGTGCTTCTTGACGCCGAGGACAAACAACAACAAAACCGTGCCATACAGATATGGATAAGAAGACTCAAAGATGATGTGCTTCTTCCTGCTGATAACTTGCTAGATGAGTTTCTTATTCAAGATATGAGACACAAAATGGAGGAAACTAATAAGAACAAAATGACCAAGGTACTTCATTCCTTATCTCCAACTAGAATTGCTTTTCGCCACAAAATGGCTCATAAGATTGATAAAATACAAAAGAAATTTGATGATGTTGTGAAAGATATGTCTGGGTTGAATCTGATCCCAAACGTCGTGGTGGTTGAACATAGTAACAGTGTAAAGAGGGAAACTAGTTCATATGTGTTAGAATCTGATATCATTGGAAGAGAAGATGATAAAATCAAGATTATACGCTTGTTAAGAGAACCAAATATGGACCAGAATGTCTCTGTGGTTGCTATTGTTGGGATTGGTGGTTTAGGAAAAACAGCTCTAGCCCAATTGGTATACAATGATGGTGAAGTAGCAAAGATTTTTGAAAAGAGGATGTGGGTATGTATCTCTGATAACTTTGATGTCAAAACTATTGTGAAAAAAATGTTGGAGTTAGTAACCAAAGGCAAAATTGATGATAAGTTAACATTAGAAAACTTGCAAAATATGCTTCGTGACAACTTAACTGATAAGAGATACTTGTTAGTTCTAGATGACATTTGGAACGAGAGTTTTGAAAAATGGACTCAATTGAGGACTTATTTGATGTGTGGGGCTCAAGACAGTAAGGTTGTAGTGACAACTCGTACAAAAACTGTAGCACAGACAATGGGTGTAAGTGTTCCCTATACTCTGAATGGTTTGAATCCAAAAGAATCTTGGAGTTTGTTGAAGAAAATTATTACATTTGGGGATGAGACTAAAGGAGTGAATCAAATTCTTGAACCATTTGGTAAGAAGATAGCAGAAAAGTGTGGGGGTGTTCCACTAGCAATCAGAACGTTGGGGGGCCTATTACAGGGTAAAGGCGAAAAAAAGGAATGGATTGCTATTTTACAAGGTGACTTTTGGAAATCATGTGAAGATGAAGATAGCATCATGCCAGTGTTGAAACTAAGTTACCAAAACTTGTCGCCTCAACTAAGACAATGTTTTGCTTATTGCTCTTTATATCCTAAGGATTGGGAAATACAGAAGGATGAGTTGATTCAATTGTGGATGGCACAAGGTTATCTTGAATTTTCAGATGAAAAGGAGATCTTGGAAGATATTGGTAACCGATTCGTAAATATCTTCTTGATGAAGTCATTTTTCCAAGATGCTCAAGTTCATGCCGGTGATTTATATAGTTTTAAAATGCATGATTTAATACATGATCTTGCAATGCAAGTAGCCGGCAGTGATTGTTGTTACTTGGATAGTGAGACAAAAAGACTTGTTGGAAGTCCCATCCATGTAATGTTGAAAAGTGATGCTATTGGTTTGTTAGAGTCATTGGAAGCAAGCAGAGTGCGAACTTTAATTTTCCAGACCAATAATTCAAAGAGATGGAATGAAAAGGAATTGTCTGTTATTTCAAAATTCAAATACTTACGCTTTTTGAAGCTTTCAGATTGTTCTATAAGTGAGTTGTGTGATTCAGTTGGAAATTTAGAGCAGTTAAGATATCTTCAGTTATGGTATTGTGTAGGACTAAAAGGCCTTTTCAAATCCATAAGTAACATTGTTTGTCTTCAAACACTTATATTGAATGGGTGTGAAATAGTTGAATTTTCTACAAAAGATGTCTTAAGTTTAATCAATTTGAGAAATCTTCAAATTGAAAATTTAAAAGCATTTAAAGAGAAGAAGAAAACGTATGGATTTGGAAAATTAAGCTCGAGGGAGCGGTATAAGGATTTATTTTTTTCTAATTGGCTTTCTTCACTCAAAAACATTGTTCGAATATTTCTTAAGAACTGTGAAGGCGTGCAGCATCTCCAACCAATGGAATGTCTCCCATTCCTAAAGTATCTTTTTATAGGTGACCTACATGAGTTGGAGTACATATATTGTGAAGAGCCTCTTTTATCCGAAGAATTCTTCCCTTCTTTGGAGTACCTCGGAATATGTGGATGTGAAAAATTGAAAGGATGGTGGAGGGTAAGGGATGATAACTCTTCACAATCATATCATCTCTCCTTTCTGCCTTGTCTCTCTTACTTAACTATCATTGATTGTCCAATGTTAACTCACATGCCCACTTTTCCAAACCTCGACGAGAAATTGGTTTTCTGGGATTGTAATATGAACACATTGGAAGCAACATTAAACATGGTAAAATCAAATTCTTCGAATGAATTCCCTCCACTTTCCATGCTAAAACACTTGTTTCTTGGCGGACATGAGCTGCACGTTAAAACACTTCCAAATGATTGGATGCAAAATCTGACTTCTCTCAAGCATCTTGTTTTTTATTGGCTTCCAAATGAAACATTTCAAGAAATTGAAATTTGGTTTAAGGACAAACTCAACTATCTTCCTTCCTTGCAAAGTATTGAAATATCACATTGTTCCGATCTAGAGGCATTTCCAGCTTGGATTTGCAACCTCTCGTCACTTCAGCATATCACCATTTCAGAATGTCAAGTTTTAGTTTCACTGCCAGATGGAATGCCTCATCTTACCAACTTACAAACCCTTATAATCATTAGGTGTCCCCTCTTAATTGAAGAGTGCCAGACAGAAACAAGTGCAACATGGCCCAAAATTGCTCACATCCCAAACATAATCTTAAAGTGA 2901 0.364 MVEQIPYGVATSLINRLASAAFHEFGRIYGVMDELERLKNTVEAIRAVLLDAEDKQQQNRAIQIWIRRLKDDVLLPADNLLDEFLIQDMRHKMEETNKNKMTKVLHSLSPTRIAFRHKMAHKIDKIQKKFDDVVKDMSGLNLIPNVVVVEHSNSVKRETSSYVLESDIIGREDDKIKIIRLLREPNMDQNVSVVAIVGIGGLGKTALAQLVYNDGEVAKIFEKRMWVCISDNFDVKTIVKKMLELVTKGKIDDKLTLENLQNMLRDNLTDKRYLLVLDDIWNESFEKWTQLRTYLMCGAQDSKVVVTTRTKTVAQTMGVSVPYTLNGLNPKESWSLLKKIITFGDETKGVNQILEPFGKKIAEKCGGVPLAIRTLGGLLQGKGEKKEWIAILQGDFWKSCEDEDSIMPVLKLSYQNLSPQLRQCFAYCSLYPKDWEIQKDELIQLWMAQGYLEFSDEKEILEDIGNRFVNIFLMKSFFQDAQVHAGDLYSFKMHDLIHDLAMQVAGSDCCYLDSETKRLVGSPIHVMLKSDAIGLLESLEASRVRTLIFQTNNSKRWNEKELSVISKFKYLRFLKLSDCSISELCDSVGNLEQLRYLQLWYCVGLKGLFKSISNIVCLQTLILNGCEIVEFSTKDVLSLINLRNLQIENLKAFKEKKKTYGFGKLSSRERYKDLFFSNWLSSLKNIVRIFLKNCEGVQHLQPMECLPFLKYLFIGDLHELEYIYCEEPLLSEEFFPSLEYLGICGCEKLKGWWRVRDDNSSQSYHLSFLPCLSYLTIIDCPMLTHMPTFPNLDEKLVFWDCNMNTLEATLNMVKSNSSNEFPPLSMLKHLFLGGHELHVKTLPNDWMQNLTSLKHLVFYWLPNETFQEIEIWFKDKLNYLPSLQSIEISHCSDLEAFPAWICNLSSLQHITISECQVLVSLPDGMPHLTNLQTLIIIRCPLLIEECQTETSATWPKIAHIPNIILK 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03923 966 Gene3D - 414 504 IPR036388 -
Vivi7g03923 966 PANTHER DISEASE RESISTANCE PROTEIN RP 35 794 IPR044974 GO:0006952
Vivi7g03923 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 428 IPR027417 -
Vivi7g03923 966 FunFam Probable disease resistance protein At1g61300 150 322 - -
Vivi7g03923 966 SUPERFAMILY L domain-like 485 958 - -
Vivi7g03923 966 Gene3D - 10 124 - -
Vivi7g03923 966 Gene3D - 327 413 IPR042197 -
Vivi7g03923 966 Gene3D Ribonuclease Inhibitor 531 794 IPR032675 -
Vivi7g03923 966 Gene3D Ribonuclease Inhibitor 795 953 IPR032675 -
Vivi7g03923 966 Gene3D - 152 321 IPR027417 -
Vivi7g03923 966 Pfam Rx N-terminal domain 11 98 IPR041118 -
Vivi7g03923 966 Coils Coil 35 55 - -
Vivi7g03923 966 FunFam Probable disease resistance protein At1g63360 414 503 - -
Vivi7g03923 966 Pfam NB-ARC domain 172 416 IPR002182 GO:0043531
Vivi7g03923 966 CDD RX-CC_like 7 133 IPR038005 -
Vivi7g03923 966 PRINTS Disease resistance protein signature 365 379 - -
Vivi7g03923 966 PRINTS Disease resistance protein signature 193 208 - -
Vivi7g03923 966 PRINTS Disease resistance protein signature 878 894 - -
Vivi7g03923 966 PRINTS Disease resistance protein signature 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03923 Vivi-Chr7 105223496 105228729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03923 190 504 WRKY Transcription Factor Family AT5G45050 25.538 5.54e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03923 - - tpra:123883200 1303.5