Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03917 ATGTTTTCTTCATCATCCAAACCCCAATGGATCTACGAGGTGTTCATCAATTTTAGGGGAAAAGACACTCGCAGCAATTTCGTTTCTCATCTCTATGCAGCACTCTCAAATGCTGGAATCAACACTTTTCTCGACGATGAGAATCTTGAAAAGGGAAAGGAACTTGGACCAGAGCTACTGCGAGCAATTGGAGGTTCTCGGATATTCATAGTTGTTTTCTCAGAAAACTACGTTCATTCTAGTTGGTGTCTTGATGAACTCGAACAAATCATGAAGTTCCACAGAGATAAGGATCGAGTTATTCTTCCTTTATTTCACGGTGGTATTACCCCTTCGTATATACGTGAATATGCTAAGCAAACTTTCGGAGAAGCTGTCAATAAAAGTAACAACACAAATAATTTGGAAAATCCACCAAAGACAACACTCAACAAATCTTCCACTTGGGCTGCTTGGGATATAAGTCACAGGAGTGATGTGAAGGAAAATCCACGAAAGAAAGCACTCACCGATGCTTCGAATTTGGCTGGTTGGGATATGAATAATTACAGTAACGAAAGCAGCGTTGTGAAGGAAGTTGTTGGCCAAGTTTTGAAAAAGCTAGACAAAAAATGCTTACCTATCCCAGATTTTCCAGTTGGACTAGAATCCCGTGCGGAACAGTTGATTCGGTTTTTAAGACAGAACACAAGAGAAGTTTGTTTAGTAGGGATTTGGGGAATGGGGGGAATTGGCAAAAGCACCATTGCCAAAGTCATCTACAATAATCTTTGTTATGAATTTGAAGATCGAAGCTTCCTTGCGAATATTAGAGAAGTTTGGGAGAAAGATAGAGGCCAAAAGGATTTACAAGAACAACTTCTTTCAGATATCCTAACAAGAAAAATAAAGGTGCGTAGTGTTGAGTTGGGAAAAGCTATGATCAATGAACGGCTCTCCACAAAACGGGCACTTGTTGTACTTGATGATGTTAGTACGCTGGAGCAACTAAAGGCACTATGTGGGAATCGAAATGGGATTGGTTCAGGAAGTATAATAATCATCACAACAAGAGATGTGCATCTACTTGATATCCTTGGAGTTGACTTTATTTATGAAGCGGAGGAATTGAATGCGATCGAGTCCCTTGAGCTTTTCAGTTGGCATGCGTTTAAGGAGGGGCATCCAGCTGAAGGTTTCCTTAGCCTCTCAGGAGATGTAGTTTCCTATTGTGGTGGACTGCCACTAGCTCTTGAAGTCCTTGGATCTTACTTGTGCAAGAGGAGAAAACAAGACTGGCGGAGTGTATTATCAAAGCTAGAAAAGATACCCAATGATCAAATACATGAGAAACTAAAAATTAGCTTTGATGGTTTAGAGGATCGTATGGAAAAGGACATATTTCTTGATGTGTGTTGTTTCTTTATCGGTAAGGACAAAGTTTATGTTACTGAGGTACTAAATGGTTGTGGATTTCATGCTGATATTGGAATAACAGTACTGATAGAAAGAAGCCTCATAAAAGTTGAAACGAATAATAAGCTTGGAATGCATGCTTTGCTACGAGACATGGGAAGAGAAATTGTTCGTGAAAGTTCACCCGAGGAGCCTGAGAAACGTAGTCGATTGTGGTGTCATGAGGATGTAGTTAATGTATTAACTGACCACACCGGAACAAATGCCATTGAAGGATTGGTTATGAAGTTGCAAGGGACCAGTGGTGTTTGCTTCGACACTATAGCTTTTGAAAAAATGAAGAGATTGAGATTGTTGCAACTTGATCATGTACAATTCATAGGAGATTATGGGTGTTTTCCAAGGAACCTGAAATGGCTTTCTTGGCAAGGATTTCCTTTAAAATACATGCCAGAAAACTTTTATCAGAACAATCTAGTTGCTATGGACTTAAAACACAGTAATCTTACACAAGTTTGGAAGAAGCCTCAGTTGATGCAGAAGCTGAAAATTATCAATCTCAGTCATTCCAAGTGCTTAAAAAGCACCCCTGACTTTTCAAAATTACCGAACCTAGAAAAACTCGTTATGAAGGATTGTCAAAGTTTGTCCGAGGTGCACTCGTCCATTGGAGATCTCAAGAATCTTCTTTTGATAAATTTGAAGGATTGTACAAGCCTTAGCAATCTCCCAAGAGAGATATATCAATTGACATCAGTGAAAACTCTCATCCTCTCCGGCTGTTCAAAGATTGACAAGTTGGAAGAAGACATGGGGCAGATGGAATCCTTGAAAACACTGATTGCAAAAGATACATCCGTAAAAGAAGTTCCATATTCAATACTAAGATTAAAAAGTATTGGATATATATCCCTTTGTGGATATGAAGGATTACCGCATGATGTTTTTCCATCTCTCATTCGGTCTTGGATGTCACCAACAATGAATTCCTTATCACGCATTCCTCCTTTCGGTGAGATTCAACTGAAACAAGAATTCAAAAGATTTCTTGATGATCTATACGGTGCCGGTCTTACTGAACTGGGAACATCACATGCACCGCAAATTTCAGATATTTCCTTGAGATCTGTTTTGATTGGAATTGGAAGTTGCCACATTGTCATCGATACTCTTGAGAAGAGCTTATCACAGAGATTGGCAACCAATTGTAGCAATTCTTTCTTTCCTGAAGACAATTATCCTTCTTGGTTAGTCTATAGAGGTGAAGGACCTTCGGTAAAATTTCAAGTTCCCGAGGATACCGATTCTGCAATGAAGGGCATAACTCTTTGTGTTCTTCATTCATCAAGACCTGAAAATCCGACATCTGAATGTTTCACTAGTGTCTTGATTATTAATTACACAAAATTCACTATCCATATTTACAAAGGAGACACGGTAATATCGTTTAATGATGAAGATTGGCTAAGCGTGAAATCAAATTTAGGAGTTGGTGACAATGTGGAGATTTTTGTAGCTATTGGGCACGGATTGACTGTTAAGGAGACGACTGTCTATCTAATATATGGAACGGAAGTTGACCCAACAATTCAAGTGGAAGCACATCCATCACCTGATGTGAAAACGGAACAATCACTTTTTGTCAAGAATGAACCATTACCGAAGACAAACAGAATTTCTTTTATAGGATTTGTAAAAAGAGTGAGAAAATGTTTATGCTTGAACCAGGATTGA 3129 0.3889 MFSSSSKPQWIYEVFINFRGKDTRSNFVSHLYAALSNAGINTFLDDENLEKGKELGPELLRAIGGSRIFIVVFSENYVHSSWCLDELEQIMKFHRDKDRVILPLFHGGITPSYIREYAKQTFGEAVNKSNNTNNLENPPKTTLNKSSTWAAWDISHRSDVKENPRKKALTDASNLAGWDMNNYSNESSVVKEVVGQVLKKLDKKCLPIPDFPVGLESRAEQLIRFLRQNTREVCLVGIWGMGGIGKSTIAKVIYNNLCYEFEDRSFLANIREVWEKDRGQKDLQEQLLSDILTRKIKVRSVELGKAMINERLSTKRALVVLDDVSTLEQLKALCGNRNGIGSGSIIIITTRDVHLLDILGVDFIYEAEELNAIESLELFSWHAFKEGHPAEGFLSLSGDVVSYCGGLPLALEVLGSYLCKRRKQDWRSVLSKLEKIPNDQIHEKLKISFDGLEDRMEKDIFLDVCCFFIGKDKVYVTEVLNGCGFHADIGITVLIERSLIKVETNNKLGMHALLRDMGREIVRESSPEEPEKRSRLWCHEDVVNVLTDHTGTNAIEGLVMKLQGTSGVCFDTIAFEKMKRLRLLQLDHVQFIGDYGCFPRNLKWLSWQGFPLKYMPENFYQNNLVAMDLKHSNLTQVWKKPQLMQKLKIINLSHSKCLKSTPDFSKLPNLEKLVMKDCQSLSEVHSSIGDLKNLLLINLKDCTSLSNLPREIYQLTSVKTLILSGCSKIDKLEEDMGQMESLKTLIAKDTSVKEVPYSILRLKSIGYISLCGYEGLPHDVFPSLIRSWMSPTMNSLSRIPPFGEIQLKQEFKRFLDDLYGAGLTELGTSHAPQISDISLRSVLIGIGSCHIVIDTLEKSLSQRLATNCSNSFFPEDNYPSWLVYRGEGPSVKFQVPEDTDSAMKGITLCVLHSSRPENPTSECFTSVLIINYTKFTIHIYKGDTVISFNDEDWLSVKSNLGVGDNVEIFVAIGHGLTVKETTVYLIYGTEVDPTIQVEAHPSPDVKTEQSLFVKNEPLPKTNRISFIGFVKRVRKCLCLNQD 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03917 1042 SMART till_3 11 175 IPR000157 GO:0007165
Vivi7g03917 1042 SUPERFAMILY L domain-like 524 806 - -
Vivi7g03917 1042 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 746 IPR044974 GO:0006952
Vivi7g03917 1042 Pfam TIR domain 12 201 IPR000157 GO:0007165
Vivi7g03917 1042 Gene3D - 9 202 IPR035897 -
Vivi7g03917 1042 Gene3D - 369 453 IPR042197 -
Vivi7g03917 1042 Pfam NB-ARC domain 217 438 IPR002182 GO:0043531
Vivi7g03917 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 463 IPR027417 -
Vivi7g03917 1042 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 117 IPR035897 -
Vivi7g03917 1042 ProSiteProfiles TIR domain profile. 10 201 IPR000157 GO:0007165
Vivi7g03917 1042 Gene3D - 203 362 IPR027417 -
Vivi7g03917 1042 Gene3D Ribonuclease Inhibitor 559 838 IPR032675 -
Vivi7g03917 1042 PRINTS Disease resistance protein signature 404 418 - -
Vivi7g03917 1042 PRINTS Disease resistance protein signature 235 250 - -
Vivi7g03917 1042 PRINTS Disease resistance protein signature 311 325 - -
Vivi7g03917 1042 PRINTS Disease resistance protein signature 713 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03917 Vivi-Chr7 105187940 105195688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03917 2 762 WRKY Transcription Factor Family AT4G12020 30.307 7.88e-81 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03917 - - vvo:131619861 1691.78