Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03908 ATGCTTCGATTTCTCTCCAATGGGTCAAATCTTTTTCAGCAGCTTACATTCATCCCTACTATCTTAAAATCGTTGCCAGTTTTCACGCCTGCCACCTATTCGACAAATGTCCCAGCCGAAAATGAGGTTAAATTACAAAAATCAAGAGATAAATGGAAGGATGCCACTGAAGTTTTAAGTAAATGGGGTTGTGGTGGAGACGATATGAAGAGAATATTTACCCGTTGCCCCGCATTGCGCTATGCCGATCCTTCTCAGATTCAATCAAAACTCTGCTTGCTTAGTGACTTGGGTTTAGGGTCATCTGAGCTAGTGAAGATTATCAATTGCAGGCCTCGGTTTTTCAGGACGCGGATTAACCATAAGTTCGGAGAGAGGCTTGACTCTCTTATGTCATTGTTTGAGTCAAAGGAAATGCTTCACAAGGCCATTGTAAGAAACCCTTCATTGTTATGTGAAAATAGCTATGACATCGAAGGTATTGTTGCACAATATGAAAAGTTAGGTGTGCCGAAAAGGGACTTTGTTAAAATGCTGATTTTGCGGCCGACAATCATTTCAAGGACTTCCTTTGACGATGAGAAACTTGAGTATATAAGTAGGGCTAGGGTTTCGAAGGATGCTAAGTTGTACAAGTATGTGGTGACACTAATAGGGATTTCTCGTGTGGACACGATTCGTGAAAAGGTCTTGAATCTAGCAAAGTTTGGTTTTTCGGATGATGAGATACTTGCTCTTTTTGGGAGGTCTCCTAATATTTTGACATTGTCGACCGATAAGGTTCAGAGGAACATGACTTTCATTTTAGGTACAATGAAGCTTGAAGCTAAGACGATCTTAAAGTACCCGAATCTCTTGTTCGCAAATATGGAGACTGTTTTGAAGCCAAGAGGGCTTCTAGCAATGAAGATACAAGATATGGATTCCAAGTTGAAAATACCCTCAATACATAAGGCATTGAGGATGTCAGAGGAGAGGTTTTTAAAATTGTTTGTTGAATGTCATGACAAGGAAATAGCTGATGAATTAATGGAGTTTTATAAAAGGACAAAAGAGGTTAAAAGATTAGCAGCTTCATCAAAGACTTGTACTTCTAGAGGTTTCCCTTTTTGA 1113 0.3953 MLRFLSNGSNLFQQLTFIPTILKSLPVFTPATYSTNVPAENEVKLQKSRDKWKDATEVLSKWGCGGDDMKRIFTRCPALRYADPSQIQSKLCLLSDLGLGSSELVKIINCRPRFFRTRINHKFGERLDSLMSLFESKEMLHKAIVRNPSLLCENSYDIEGIVAQYEKLGVPKRDFVKMLILRPTIISRTSFDDEKLEYISRARVSKDAKLYKYVVTLIGISRVDTIREKVLNLAKFGFSDDEILALFGRSPNILTLSTDKVQRNMTFILGTMKLEAKTILKYPNLLFANMETVLKPRGLLAMKIQDMDSKLKIPSIHKALRMSEERFLKLFVECHDKEIADELMEFYKRTKEVKRLAASSKTCTSRGFPF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03908 370 Pfam mTERF 176 328 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 Pfam mTERF 57 185 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 Gene3D Transcription termination factor 3, mitochondrial 193 346 IPR038538 -
Vivi7g03908 370 PANTHER CGI-12 PROTEIN-RELATED 28 336 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 SMART mt_12 276 314 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Vivi7g03908 370 FunFam Mitochondrial transcription termination factor family protein 123 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03908 Vivi-Chr7 105127966 105130506 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g03908 mTERF 1.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03908 K15031 - gmx:100799629 453.366