Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03898 ATGAAGCCATTTTCAATTTTCCTCACCTTCACCATCTTCATCATCGCATCAGCATTAGTTGCTGCGAAGAATGCTGCTGATGTAACCGAGTTGCAGATTGGCGTTAAGTATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTACCGGGGAAAACTCACCGATGGAACTGTATTCGATTCTAGCTTTGAAAGAAACAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGGATGGGACCAAGGATTATTGGGAATGTGTCTTGGTGAGAAGCGAAAATTGAAAATCCCAGCAAAACTTGGCTATGGAGAACAGGGTTCTCCACCAACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTGGGAGTGAATGACAAAAGCTTAAGCGAAGAAAAACCAACCTCGTCCGAACTGTAG 456 0.4298 MKPFSIFLTFTIFIIASALVAAKNAADVTELQIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKPTSSEL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03898 151 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Vivi7g03898 151 Gene3D - 15 150 IPR046357 GO:0003755
Vivi7g03898 151 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
Vivi7g03898 151 PANTHER PEPTIDYLPROLYL ISOMERASE 9 139 IPR044609 GO:0000413|GO:0003755|GO:0061077
Vivi7g03898 151 FunFam Peptidylprolyl isomerase 17 137 - -
Vivi7g03898 151 SUPERFAMILY FKBP-like 35 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03898 Vivi-Chr7 105006326 105008450 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03898 49 134 Calmodulin-binding Proteins AT3G25230 61.628 5.70e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03898 K09569 - gmx:100305479 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g01545 6 70983698 70989216 Vivi7g03898 7 105006326 105008450 PCT