Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03870 ATGACTTTCTTTGCTAATAAGTTCTACATAGTCTTCATGTTCCTCTATCTTCTCCTTCTCTTCATTTCCACATGTGTGGTGGAAGCAATACTTTGTGGAAGGCCATGTAAAACATGGACAGGGCCTTGTTTTTTTAACTTGTCTTGTAATGCAGAGTGCATTGACAAAGAGCAGTCAATTTTTGGAACTTGTGAACACTTAAAATGCTTCTGCTACTTTGATTTGCAATTTTTTCTGCGAGACGGTATCGCTTCAGTCCTGTTGCGGGATATCTTGGGTTTCTTGCCAATATTTTTCATCCATATAAACTCTTTCACTTATAAGCATTTTGTTGGTACCTTTTGTAGAGAACATCTTTTACATTTACAAATCATGACTTTCTTTGCTAATACTAAGTTTTACACAATCTTATTGTTCCTCTATCTTCTCATTCTCTTCATTTCCACATGTGAGGTGAAAGCAAGACTTTGTGGAAGGCCAAGTAACACATGGAGAGGGCCTTGTTATATTAACATTTCATGTAATGCAGAGTGCAATGTCAAAGAACAAGCAACTTATGGTACTTGCAAACAATTTGAATGCTTCTGCTTCTTTGATTGTTCAACACAATAA 612 0.3611 MTFFANKFYIVFMFLYLLLLFISTCVVEAILCGRPCKTWTGPCFFNLSCNAECIDKEQSIFGTCEHLKCFCYFDLQFFLRDGIASVLLRDILGFLPIFFIHINSFTYKHFVGTFCREHLLHLQIMTFFANTKFYTILLFLYLLILFISTCEVKARLCGRPSNTWRGPCYINISCNAECNVKEQATYGTCKQFECFCFFDCSTQ 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03870 203 SUPERFAMILY Scorpion toxin-like 155 200 IPR036574 -
Vivi7g03870 203 ProSitePatterns Gamma-thionins family signature. 155 178 IPR008176 GO:0006952
Vivi7g03870 203 SMART gth_4 156 200 IPR003614 GO:0006952
Vivi7g03870 203 SMART gth_4 31 75 IPR003614 GO:0006952
Vivi7g03870 203 Pfam Gamma-thionin family 155 200 - -
Vivi7g03870 203 Pfam Gamma-thionin family 31 73 - -
Vivi7g03870 203 PANTHER DEFENSIN-LIKE PROTEIN 1 132 197 - -
Vivi7g03870 203 Gene3D - 155 200 IPR036574 -
Vivi7g03870 203 Gene3D - 31 74 IPR036574 -
Vivi7g03870 203 SUPERFAMILY Scorpion toxin-like 31 73 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03870 Vivi-Chr7 104809351 104814607 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03870 9 74 Plant Defensins Gene Families AT1G19610 34.247 1.13e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03870 - - vvo:131619906 436.417