Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03845 ATGGCTATTCCTAAAGTGAATGAAAAGTTACTTGAAGACCTTCAAGTGATGGGATTTCCACAAGCAAGAGCAACAAGAGCACTCTATTATTCTGGAAATACAAGCTTAGAGGATGCTATAACTTGGATGATTGATCATGAAAATGACACTGACATTGATGAGTTTCCATTGGTTGATGTAGACATTATCGATATCGATACATCTTCATCATTTCCTATCACAGAAGAAATGAGAATGAAAGCTTATAGTTTAAGGGAACAAGAGAGAAAGAGGAAACGGAATGAAGAAAAAATAATCGAAAGAGAAAGGGAAAAGGAGAGGATTCAAGCAGGTAAGAAACTCCTTGAGGCGAAGAGAATCGCGGAAGAAAATGAAAGAAAACGGAATTTAGCTTTGAGAAAAGCAGAAAAAGAAGAAAAACAAAGAGCTAGAGGTAACATTCTCAAGAAACTAGAGCAGGATAAGCTAAATAGAAGATCTGAACATGGATTACCTTTAGAAAGCCAAGAAAATGTGAGATCATCCGCGATTGAAATAAAGCATGACAAGATTTCAAAGCCGGTTTATACAAGTACAAAAGTTGAGCATTTGAGAGAATGTTTGAGGTCTCTCAAGCGCGAACACAAGGGTGAGAATGCAAGAGTCAGAAGAGGCTTTGAAACACTTCTAGTGTATGTTGGAAATGTTGTCAAGAATCCAAAGGAAGAAAAATTCAGGAAGATTAGACTGAGCAATCCATTATTTCAGGATAGAGTTGGAAGTTTAGATGGAGGTGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAACAGATGAGTTCTTGTATCTTCCTAGTGAAAAGATTGACATGGGACTACTAAGTTCAGCTGGTTTTGTCTTGAATTCTGCTATCACTAATCCTTTCTTTGGACTTTTGAGTACTTAA 924 0.369 MAIPKVNEKLLEDLQVMGFPQARATRALYYSGNTSLEDAITWMIDHENDTDIDEFPLVDVDIIDIDTSSSFPITEEMRMKAYSLREQERKRKRNEEKIIEREREKERIQAGKKLLEAKRIAEENERKRNLALRKAEKEEKQRARGNILKKLEQDKLNRRSEHGLPLESQENVRSSAIEIKHDKISKPVYTSTKVEHLRECLRSLKREHKGENARVRRGFETLLVYVGNVVKNPKEEKFRKIRLSNPLFQDRVGSLDGGVEFLELCGFERTDEFLYLPSEKIDMGLLSSAGFVLNSAITNPFFGLLST 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03845 307 SUPERFAMILY PUG domain-like 193 301 IPR036339 -
Vivi7g03845 307 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Vivi7g03845 307 Gene3D - 8 53 - -
Vivi7g03845 307 MobiDBLite consensus disorder prediction 132 170 - -
Vivi7g03845 307 SUPERFAMILY UBA-like 6 56 IPR009060 GO:0005515
Vivi7g03845 307 Pfam UBA/TS-N domain 7 42 IPR015940 -
Vivi7g03845 307 PANTHER F13M7.16 PROTEIN 1 305 - -
Vivi7g03845 307 SMART PGNneu 217 278 - -
Vivi7g03845 307 Coils Coil 120 141 - -
Vivi7g03845 307 CDD UBA_PUB_plant 6 53 - -
Vivi7g03845 307 Coils Coil 84 105 - -
Vivi7g03845 307 Gene3D - 191 295 - -
Vivi7g03845 307 MobiDBLite consensus disorder prediction 132 166 - -
Vivi7g03845 307 Pfam PUB domain 215 282 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03845 Vivi-Chr7 104470451 104472523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03845 1 305 C2H2 Transcription Factor Family AT1G04850 55.987 1.97e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03845 - K24348 gmx:100781260 444.506