Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03836 ATGGCTTTTCCATCTCATAACAAACCTCACTTCTTGCTCATAACATTCCTCACATTTAGCTCCTTTTTCTCATGCTATACTTCAATCACTGACAGCCTTGCATCATCCGAATTTCTCAAAGACAATGAAACAATAACCTCGGACAGCACAAACTTCATCCTAGGTTTTTTCAGTCCATTAAACTCAACAAACCGTTACCTAGGAATCTGGTACATCAATCAAACAAACACAATATGGATTGGTAACAGAGACCAACCTGTCAAAGATTCAAACGGAATCGTCACAATTCAAAAAGATGGTAATCTTGTGATACTAGACAAACCAAAGGGTAGCATCATTTGGTCAACAAATATTTCATCATCAGCAAAAAGCATCAATTCAACAGCTCAGCTTAATGATGCAGGAAACTTGATTCTAAGAGATTTGAGTTCTGGATTAACGATTTGGGATAGTTTCACTCACCCTGCAGATGCTGCTGTTCCATCTATGAGGATTGCGGCTAATAAAGTAACGGGTGAGAAGATTTCTTTTGTTGCAAGAAAGAGCGAGAACGATCCGTCTTCGGGTCGTTTTTCAATTAGTCTCGAAAGATTGGATGCGCCGGAAGTTTTTATTTGGCATGATAAAAAGATTTATTGGAGAACCGGTCCTTGGAACGGAAGGATTTTTCTCGGATCGCCGAGGATGTCAACCGAGTATTTATTCGGTTGGCTATTGAATCCCAACGATAACGGAACTGCTTATATAACTTACAATTTCGCGGATAAGAATATGTTCGGGATTCTCTCGTTGACGCCGCACGGAACACTTAAGTTGGTTGAGTATTCGGATAAAAAGCAAGTTCTTAATCTCGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGGCCAAATGGGAATTGTGATAACTCAACGACACCGATTTGTCATTGTTTTGAGGGGTTTGAACCAAAGAATTCGGCGGAATGGAGTTCAGGAAATTGGACTAATGGCTGTGTGAGGCAAGAAGGGTTGAACTTGAAGTGTGAGATTGTGAAGAATGGATCAAGTTTGGTTAAACAAGATGGATTTTTGTTGAAACATAATATGAAAGTTCCTGATTTTAATGACAGATTTCCTGTTACTCAAGATCAATGTGGAACAGATTGTTTAGCAAATTGTTCTTGTGTGGCATATGCATATGATCCATATATATTTTGTATGCATTGGAGTAAAGAGTTGATTGATTTGCAAACATTTCCTTATGGAGGAGTTGATCTCTTCATTCGTGTCCCCGCGGAACTAGTTGCAGTTCCAGTAAGCAAAAAGAAAAAAGGGAACAAGAAGGGTGTCTTAATCATTGCCATTGCTGGAGGGATAGGAGCATTCACCTTTGTTATATGTGCTTATCTTTTGTGGAGAAAATGTTCTCCTAAACATAAAGGAAGACATCCTAGAAACTCACTTGTTAGAGAACATAAACAAATGAAGTTGGATGAGCTACCACTATATGAGTTTGAAAAGCTTGAAACTGCTACAAGAAACTTTCACTTTGGTAATATGCTTGGAAAGGGAGGTTTTGGGCCGGTGTACAAGGGTGTAATGGAGGATGGTCAAGAAATTGCGGTGAAAAGACTTTCGAAAGCGTCTGGACAAGGAATGGAAGAGTTCATGAACGAAGTCGTAGTGATTTCTAAGCTTCAACATCGCAATCTTGTAAGACTTCTTGGGTGTTGTGTTGAAAGGGGTGAGCAAATGTTGGTTTATGAGCTCATGCCAAATAAGAGTTTGGATGCATTTCTCTTTGATCCACTCCAAAAGAAAATTTTAGATTGGAAAAAGAGATCCTACATAATTGAAGGAATAGCTAGAGGCATACTCTATCTTCATAGAGATTCAAGACTAAGAATTATACATAGAGATTTAAAAGCAAGCAACATCTTACTTGATGGCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCAAGAATCGTTAAGGGTGGAGAAGATGATGAAGCTAACACTAAAAGAGTCATGGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTCTTCTCTGAGAAATCAGACGTTTATAGTTTCGGAGTTTTATTGCTAGAAATCGTTAGTGGACGAAGAAACAGTAGCTTTTATCATAGCGAGGATTCTCTTAGTCTTGTTGGATTTGCATGGAAACTATGGTTAGAAGAAAACATTATATCTCTAATAGATCCAGAGGTATGGGATGCATGTTTTGAGAGTAGCATGTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAAGTTCCAAAAGAAAGACCAAGTATATCAACAGTTGTTTTGATGCTTATAAGTGAGATTACACATCTTCCTCCACCTGGAAAAGTTGCATATGTTCATAAGCAAAATTCTAGAAGTACAGAATCTTCTCAAAAAAGTCATCAATCTAACTCAAACAATAATGTAACTATGACTGATGTTGAAGGAAGGTAA 2493 0.3811 MAFPSHNKPHFLLITFLTFSSFFSCYTSITDSLASSEFLKDNETITSDSTNFILGFFSPLNSTNRYLGIWYINQTNTIWIGNRDQPVKDSNGIVTIQKDGNLVILDKPKGSIIWSTNISSSAKSINSTAQLNDAGNLILRDLSSGLTIWDSFTHPADAAVPSMRIAANKVTGEKISFVARKSENDPSSGRFSISLERLDAPEVFIWHDKKIYWRTGPWNGRIFLGSPRMSTEYLFGWLLNPNDNGTAYITYNFADKNMFGILSLTPHGTLKLVEYSDKKQVLNLEVDQNECDFYGKCGPNGNCDNSTTPICHCFEGFEPKNSAEWSSGNWTNGCVRQEGLNLKCEIVKNGSSLVKQDGFLLKHNMKVPDFNDRFPVTQDQCGTDCLANCSCVAYAYDPYIFCMHWSKELIDLQTFPYGGVDLFIRVPAELVAVPVSKKKKGNKKGVLIIAIAGGIGAFTFVICAYLLWRKCSPKHKGRHPRNSLVREHKQMKLDELPLYEFEKLETATRNFHFGNMLGKGGFGPVYKGVMEDGQEIAVKRLSKASGQGMEEFMNEVVVISKLQHRNLVRLLGCCVERGEQMLVYELMPNKSLDAFLFDPLQKKILDWKKRSYIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGDMIPKISDFGLARIVKGGEDDEANTKRVMGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHSEDSLSLVGFAWKLWLEENIISLIDPEVWDACFESSMLRCIHIGLLCVQEVPKERPSISTVVLMLISEITHLPPPGKVAYVHKQNSRSTESSQKSHQSNSNNNVTMTDVEGR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03836 830 PIRSF SRK 3 830 IPR024171 GO:0004674
Vivi7g03836 830 SMART blect_4 36 155 IPR001480 -
Vivi7g03836 830 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Vivi7g03836 830 CDD STKc_IRAK 517 783 - -
Vivi7g03836 830 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Vivi7g03836 830 SMART ntp_6 354 426 IPR003609 -
Vivi7g03836 830 MobiDBLite consensus disorder prediction 800 830 - -
Vivi7g03836 830 MobiDBLite consensus disorder prediction 799 830 - -
Vivi7g03836 830 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Vivi7g03836 830 Pfam D-mannose binding lectin 77 181 IPR001480 -
Vivi7g03836 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 476 586 - -
Vivi7g03836 830 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Vivi7g03836 830 SUPERFAMILY Protein kinase-like (PK-like) 496 817 IPR011009 -
Vivi7g03836 830 Pfam PAN-like domain 355 412 IPR003609 -
Vivi7g03836 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Vivi7g03836 830 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03836 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 791 - -
Vivi7g03836 830 Gene3D Phosphorylase Kinase; domain 1 485 586 - -
Vivi7g03836 830 Pfam Protein tyrosine and serine/threonine kinase 512 780 IPR001245 GO:0004672|GO:0006468
Vivi7g03836 830 Gene3D Transferase(Phosphotransferase) domain 1 587 790 - -
Vivi7g03836 830 Gene3D - 24 154 IPR036426 -
Vivi7g03836 830 CDD B_lectin 36 155 IPR001480 -
Vivi7g03836 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 220 IPR036426 -
Vivi7g03836 830 CDD PAN_AP_plant 356 427 - -
Vivi7g03836 830 SMART serkin_6 511 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03836 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 152 - -
Vivi7g03836 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03836 Vivi-Chr7 104373302 104377597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03836 462 825 Receptor kinase-like Gene Family AT4G23150 52.473 5.90e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g03836 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03836 - - ccaj:109790907 1158.28