Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03832 ATGGCTGGCATAGCATTTGGAAGGTTTGATGATTCTTTCAGCTTTGGGTCAATTAAGGCCTATATTGCTGAATTCATCTCAACCTTACTCTTTGTTTTTGCTGGTGTTGGTTCTGCCATAGCCTATGGTAAGTTGACATCAGATGCAGCTCTTGATCCAGCTGGTTTACTAGCAGTTGCTGTCTGCCATGGTTTTGCATTGTTTGTTGCTGTTTCAGTTGGTGCTAACATTTCTGGTGGACATGTCAACCCTGCTGTCACTTTTGGTTTGGCTCTTGGTGGACAGATCACCATTATCACTGGTGTCTTTTATTGGATTGCTCAGCTTGTTGGCGCCATTGTTGCATGTTTTCTTCTCAAGTTTGTCACTGGAGGATTGGAAACTCCAATCCACAGTGTGGCAGCTGAAGTAGGAGTTATTGGAGGAGTTGTTACTGAAATAATCATAACATTTGGTTTGGTGTACACAGTTTATGCAACTGCAGCAGATCCTAAGAAAGGAGCAATAGGCACAATTGCACCCATTGCTATTGGTTTCATTGTTGGTGCCAACATATTAGCAGCAGGCCCATTCTCTGGTGGGTCGATGAACCCAGCAAGATCGTTTGGGCCTGCAGTTGTAAGTGGTGATTTCCATGACAACTGGATTTATTGGCTTGGGCCTCTTATTGGTGGTGGGCTTGCTGGGCTTGTCTACGGCAATGTCTTCATGCGTTCTTCTGAACATGCACCTCTTACTAATGATTTTTAA 750 0.44 MAGIAFGRFDDSFSFGSIKAYIAEFISTLLFVFAGVGSAIAYGKLTSDAALDPAGLLAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLALGGQITIITGVFYWIAQLVGAIVACFLLKFVTGGLETPIHSVAAEVGVIGGVVTEIIITFGLVYTVYATAADPKKGAIGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWLGPLIGGGLAGLVYGNVFMRSSEHAPLTNDF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03832 249 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Vivi7g03832 249 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Vivi7g03832 249 FunFam Probable aquaporin TIP1-1 2 249 - -
Vivi7g03832 249 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 Pfam Major intrinsic protein 16 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
Vivi7g03832 249 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi7g03832 249 PANTHER AQUAPORIN-8 4 243 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03832 Vivi-Chr7 104328998 104330356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03832 1 249 Major Intrinsic Protein MIP AT3G16240 81.200 2.71e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03832 K09873 - qsa:O6P43_018186 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03832 7 104328998 104330356 Vivi7g03832 7 104328998 104330356 ECH