Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03821 ATGGAAGCACCGGATTACTTTGTCGGTGGTGGATACTACGGTGCCGCCGGAGGACTCGACCAATTCTCACCGGAGAAACGTCACGGTTACAGTGATCAGAAGCCTTGTGAGCCGTTTGCCATTGATGACTTGCTTGATTTCTCCAATGCTGACGCAATTATGTCAGATGGTTTCTTCGATAACAATGTCGCCGGAAATTCAACCAACTCTTCCACCGTCACTGCTGTTGATAGCTGTAACTCGTCCGGAGATAACCGCTTTGGAGGCTCAATTGTACCGTATGGTTTCGCCAGCGATGTTCAGCTCACCGGTGAACTATGTGTTCCGTATGATGATATGGCGGAATTGGAATGGCTTTCGAATTTCGTGGAAGATTCATTCTCCGCTGAAGAGGAATTGAAAACACTGCAACTCCTCTCCGGTGCCGGTGCAGTTAAACCACAGACACCGGAATCTTCCTCTTCCACCGACACGCTTCCTCCGTTTTCGGCGGACGAGAGTTTACGCAACGCTTCGTTTCTCCGGCCGGAAACACCTCTCCCTGGGAAAGCACGGAGCAAACGCTCACGCGCTGCTCCAGGAGACTGGTCCACGCGCCTACTTCATCTGCCAGACGCGCCAGTTTCTCAGATGAAGATTATGCCGGTGAAGAAGCGTGAGGATCCGAATGCGGAATGCTCCGGGAGAAAATGTCTGCATTGCGGTACCGACAAGACGCCGCAGTGGCGAACCGGACCGATGGGACCGAAGACACTGTGCAATGCTTGCGGCGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCGGCGGCGAGTCCGACTTTCGTTTCGGCGAAGCATTCGAATTCGCATAGGAAGGTTCTGGAACTGAGGAGGCAGAAAGAGATGCAAAGATCACAGCATCAACAGCTTCTAAGTCATGGTTCAATTTTCGGCGTATCCAACGGTGGAGATGAGTTTATCAATTATCATCATCATCATCATTGTGGGCCAGAGTTTAGGCATGTGATCTAG 1020 0.5167 MEAPDYFVGGGYYGAAGGLDQFSPEKRHGYSDQKPCEPFAIDDLLDFSNADAIMSDGFFDNNVAGNSTNSSTVTAVDSCNSSGDNRFGGSIVPYGFASDVQLTGELCVPYDDMAELEWLSNFVEDSFSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPPFSADESLRNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPVSQMKIMPVKKREDPNAECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSQHQQLLSHGSIFGVSNGGDEFINYHHHHHCGPEFRHVI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03821 339 ProSitePatterns GATA-type zinc finger domain. 231 256 IPR000679 GO:0006355|GO:0043565
Vivi7g03821 339 MobiDBLite consensus disorder prediction 144 195 - -
Vivi7g03821 339 MobiDBLite consensus disorder prediction 146 165 - -
Vivi7g03821 339 FunFam GATA transcription factor 220 306 - -
Vivi7g03821 339 CDD ZnF_GATA 230 277 IPR000679 GO:0006355|GO:0043565
Vivi7g03821 339 Gene3D - 226 306 IPR013088 GO:0006355|GO:0008270
Vivi7g03821 339 ProSiteProfiles GATA-type zinc finger domain profile. 225 261 IPR000679 GO:0006355|GO:0043565
Vivi7g03821 339 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 228 288 - -
Vivi7g03821 339 SMART GATA_3 225 275 IPR000679 GO:0006355|GO:0043565
Vivi7g03821 339 PANTHER GATA TRANSCRIPTION FACTOR 33 304 - -
Vivi7g03821 339 Pfam GATA zinc finger 231 264 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03821 Vivi-Chr7 104173261 104174827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03821 37 339 C2C2-Gata Transcription Factor Family AT4G32890 47.452 4.41e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Vivi7g03821 GATA 6.8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03821 - - vvo:131618132 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03821 7 104173261 104174827 Vivi7g03821 7 104173261 104174827 ECH