Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03815 ATGCCGGTAGGGCGTAGTGGAGCGCGCCGGGGACGGCCACCGAAGCGACAACGACAGGCGCAGGGGGAGCAGCGACAGAGTCCGGTTGAAGAGGAAGCGATTGCGAATAGGACGAGACGGAGGCGTGCAGCTGCAGCGGCTGTGAACGATAAGGTTGATGAGCAGGTGGCTGTGGTTACGGCGGGAAATGAGAACGTAGTTGTTGCTGCGGTGGAGAAGGAAGGGGAGGGTGATCGGGTATTGGAAGAAGGGGGAAAGGAGAAGAAAGAGATGGAGGAATGTGATAACGGAGGTCACAGCAATGGGAAAGCTGAAGCTAGTGAAGAGGACAGTAACGCCTTGGTTATTCCTGAAAAGGTTCAAGTAGGCAATTCTCCTTTGTATAAAACAGAGAAAAAACTTGGCAAGGGTGGATTTGGTCAAGTATATTTTGGTCGGCGTGTTTCTGGTGGAAATTTGAACGAGAGAACTGGACCTGAAGCTGTAGAGGTAGCAATAAAATTCGAGCACATTAGTAGTAAAGGATGTAACCATGGACCACCGAATGAGTGGCAAGTGTACAACACCCTCGGTGGAAGTCATGGTGTGCCACAGGTGCATTACAAGGGTATGCAAGGTGAATATTTCATCATGATTATGGATATTCTAGGACCTAGCTTGTGGGATGTTTGGAATAATTATTCTCACACCCTGTCCACCGAAATGGTTGCATGTATTGCCATTGAAGCAATATCTATATTGGAGAAGATGCACTCTCTAGGGTATGTGCATGGAGATGTGAAGCCTGAGAATTTTCTGCTTGGCGCTTCTGGGACACCTGACGAAAAAAAATTGTTCCTGGTAGATCTTGGATTAGCGACTAAATGGCGGGATAGTAAATCTGGTTTGCATGTGAAATATGACCAAAGGCCTGATGTTTTCAGGGGCACAGTCCGCTATGCAAGTGTGCATGCACATTTGGGGAGAACTGGAAGCAGGAGGGATGATTTGGAATCTCTTGCATATACACTAATATTTCTTCTTCTAGGCCGTCTTCCTTGGCAGGGATTCCAGGGAGAAAACAAAGGATATCAGGTTTGCAGGAAGAAGATGGGAACGTCTCCAGAGACACTCTGTTGTTTTTGTCCCCAGCCTTTTAAAGAGTTTATTGAACATGTAGTAAGCTTAAAGTTTGATGAAGAACCTAATTATGCAAAATACATTTCTCTCTTTGATGGGGTTGTCGGTCCAAACCCAGATATTAGGCCACTTATTACAGAAGGGGCTCAAAAGCTTGTTGGTCTTAAAAGAGGCCGGTTGGCTTCCAACGAAGATGATGAACAACCCAAAAAGAAGGTTCGAATGGGTTTGCCAGCCAACCAGTGGATTAGTGTTTACAATGCCCGTAGACCGATGAAACAAAGATATCATTACAATGTGTCAAGTACAAGGCTTACCCAGCACATTGAAAAAGGAAATGAGGATGGCTTATATATTAGTAGCGTTTCTTCATCTCAAGGCCTATGGGCCTTAATCATGGATGCAGGGACAGGTTTCACTTCCCAAGTTTATAAACTCTCCCCCCAATTTTTGAACAAGGAATGGATCATGGATCAGTGGGAAAAAAATTATTATATCAGTGCAGTTGCTGGAGTTGTACATGGGAGTTCACTTGTAGTAATGTCTAAAGGCACCCAGTATTTGCAGCAATCGTACAAAGTTAGTGATTCATTTCCTTTCAAATGGATCAACAAAAAGTGGAAAGAGGGCTTTTATGTAACTTCAATGGCCACCGCAGGGCAAAAATGGGGAGTAGTTATGTCCCGTGGGGCAGGGTTTACAGAGCAGGTGGTGGAACTAGACTTTCTGTATCCTAGTGAAGGGATTCACAAGCGATGGGAGTCTGGATACCGAATCACATCGCTTGCTGCAACTTGGGACCAAGCTGCTTTTGTTCTGAGTGTTCCTAGTAAGAAGCCCCAGGACGAAACTCAGGAAACGCTAAGGACTACTGCTTTTCCTAGTACCCATGTTAAGGATAAGTGGGACAAGAACCTCTACATTGCCTCTATTTGCTATGGACGTACCGTTTCTTGA 2076 0.4542 MPVGRSGARRGRPPKRQRQAQGEQRQSPVEEEAIANRTRRRRAAAAAVNDKVDEQVAVVTAGNENVVVAAVEKEGEGDRVLEEGGKEKKEMEECDNGGHSNGKAEASEEDSNALVIPEKVQVGNSPLYKTEKKLGKGGFGQVYFGRRVSGGNLNERTGPEAVEVAIKFEHISSKGCNHGPPNEWQVYNTLGGSHGVPQVHYKGMQGEYFIMIMDILGPSLWDVWNNYSHTLSTEMVACIAIEAISILEKMHSLGYVHGDVKPENFLLGASGTPDEKKLFLVDLGLATKWRDSKSGLHVKYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLLGRLPWQGFQGENKGYQVCRKKMGTSPETLCCFCPQPFKEFIEHVVSLKFDEEPNYAKYISLFDGVVGPNPDIRPLITEGAQKLVGLKRGRLASNEDDEQPKKKVRMGLPANQWISVYNARRPMKQRYHYNVSSTRLTQHIEKGNEDGLYISSVSSSQGLWALIMDAGTGFTSQVYKLSPQFLNKEWIMDQWEKNYYISAVAGVVHGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWKEGFYVTSMATAGQKWGVVMSRGAGFTEQVVELDFLYPSEGIHKRWESGYRITSLAATWDQAAFVLSVPSKKPQDETQETLRTTAFPSTHVKDKWDKNLYIASICYGRTVS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03815 691 SUPERFAMILY Protein kinase-like (PK-like) 128 408 IPR011009 -
Vivi7g03815 691 ProSitePatterns Protein kinases ATP-binding region signature. 134 167 IPR017441 GO:0005524
Vivi7g03815 691 MobiDBLite consensus disorder prediction 1 38 - -
Vivi7g03815 691 CDD STKc_CK1 128 404 - -
Vivi7g03815 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Vivi7g03815 691 Pfam Protein kinase domain 128 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03815 691 ProSiteProfiles Protein kinase domain profile. 128 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03815 691 SMART serkin_6 128 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03815 691 MobiDBLite consensus disorder prediction 75 106 - -
Vivi7g03815 691 PANTHER CASEIN KINASE-RELATED 128 661 - -
Vivi7g03815 691 MobiDBLite consensus disorder prediction 75 111 - -
Vivi7g03815 691 Gene3D Transferase(Phosphotransferase) domain 1 91 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03815 Vivi-Chr7 104052409 104058246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03815 127 290 EF-hand Containing Proteins AT4G38230 28.571 4.58e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Vivi7g03815 Pkinase 1.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03815 - - gmx:100799630 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03815 7 104052409 104058246 Vivi7g03815 7 104052409 104058246 ECH