Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03813 ATGAAAGAGTTAACTTCAAACGAATCACCGTTCCTTAACCTCTCGATGGATGAGATACTGGAATTGGAAAGAGCTTATAATGGTGCTAGAGAAAAATCACTCGATCAGAGTTTCTGCATGGAGATTGCTACAAGTTTGAGTTCCTTATCAAATAAAAAATCCTTATCATGGGAACAGGTGCAGCAGTGGTTCCAAAATAAACATAGAGAGTTGACGGGTCAAGTTGTTTCATCAGTTGAGCTTGAGGGGCTGAATCTTTATGTTGATCTTTCGGATGAATCTTCTTCAAGAAAGGAACATAAGATCTCTCCGAATCCAAAAGGTATTAAAGCGGAAGATTTGTCGGAATTGGGATATGAATCAATATCTATAAAAGACAAAGCATGGCATGATGTTGCAATGTTTCTTAACTATAGAGTTCTAAGCACAGGCGAACTTGAAGCTCGTGTACGATATCATGGATTTGGTAAGGAGGAAGATGAATGGGTTAATGTGAAAGAAGGGGTGCGAGAGAGATCCATCCCACTGGAAGCTTCCGAATGTCACAAGGTTAAGGAAGGACATCTTGTACTATGTTTCTTGGTAAAATCTGATTATGCCCTCTACTGTGATGCCCGTGTTTTGAAAATCGAGAGGAGGGTGCATGATAGCAAAGAGTGTACCTGCACCTTCACTGTCCGATTTTACCATGACATGTCTGAGGAAGAGGTTCGTTGTGACAGTTTGTGCTGTAGACCAACACAGGAAGAAGCTGAGGCCCCCTTAGAACCTTTCATGAATCCCATAGCGACCTTGTGGGGATGA 804 0.4167 MKELTSNESPFLNLSMDEILELERAYNGAREKSLDQSFCMEIATSLSSLSNKKSLSWEQVQQWFQNKHRELTGQVVSSVELEGLNLYVDLSDESSSRKEHKISPNPKGIKAEDLSELGYESISIKDKAWHDVAMFLNYRVLSTGELEARVRYHGFGKEEDEWVNVKEGVRERSIPLEASECHKVKEGHLVLCFLVKSDYALYCDARVLKIERRVHDSKECTCTFTVRFYHDMSEEEVRCDSLCCRPTQEEAEAPLEPFMNPIATLWG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03813 267 Gene3D - 114 175 - -
Vivi7g03813 267 Pfam SAWADEE domain 117 243 IPR032001 GO:0003682
Vivi7g03813 267 Gene3D - 176 248 - -
Vivi7g03813 267 Pfam Homeodomain 13 67 IPR001356 GO:0003677
Vivi7g03813 267 Coils Coil 12 32 - -
Vivi7g03813 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 12 252 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03813 Vivi-Chr7 104035835 104040794 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vivi7g03813 SAWADEE 6.8e-36 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03813 - - gmx:100799110 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03813 7 104035835 104040794 Vivi7g03813 7 104035835 104040794 ECH