Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03806 ATGTTCAAATTCCTCAAAGACGTCGTTGGCGGATCTGGAACTGGCATCAAAGATCTCCCTTACAACATCGGCGAACCTTATCATTCCGCTTGGGGTTCGTGGATTCATCACCGTGGCACTTCGAAGGATGACGGTTCTCCGGTTTCGATTTTTACTTTATCTGGAAGTAATGCTCAGGATGGACATTTAGCTGCGGGTCGAAATGGTGTCAAGCGTCTAAGAACTGTTAGGCATCCGAATATTTTGTCGTTTCTTCATAGTACCGAGATCGAAACTTTTGATGGTGGTGCTTCTAAGGTCACGATATATATTGTGACAGAACCTGTAATGCCACTTTCAGATAAGGTTAAGGAGCTGGGACTTGAGAGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAGATATCGAAAGCTGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTCACACAAACTCTGGACTGGAAACTTCATGCTTTTGATGTTCTCTCAGAGTTTGATGGGAGCAATGAAACATCCTCCACGCAAATGCTGCAATATGCATGGCTTGTTGCAACTCAATACAAAGCAATGGAACTGGCAAAATCTGACTGGGCTGTAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGTCTTATCTATGAGCTATTTTCTGGTTTGAAGTTGAGCAAAACAGAAGAGTTACGTAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTGAGTTCCACACCTTCTCGTAGATTGAATACTTCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACGATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTTGAGAAGGACACCTTCTTCCGTAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTCTGACTGCATTGTTGAAAATGGGTTCGTGGCTTTCAGCCGAGGAGTTTCGTGTCAAGATTCTTCCTACAATAATTAAACTCTTTGCCTCCAACGATCGAGCTGTCCGTGTTAGCCTTCTCCAACATATTGATCAATTTGGAGAGTCATTATCAGCTCAAGCTGTTGATGAGCAGGTTTACCCTCACGTTGCTACTGGTTTCTCCGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCAAAACTGTCTCAAAGGACCTTGTCTGGATCATTATTAAAGCATCTGTCGAAGCTACAGGTCGATGAAGAGGCAGCAATACGAACAAATACTACTATCTTGCTAGGAAATATTGCAAGTTACTTAAATGAAGGGACAAGAAAAAGAGTGTTGATTAATGCTTTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACTAGTTCCAACTATGACATCAATGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTCCTCACAATTGATCCTGACAGTGATGTTCGATCGAAGGCATTTCAAGCTATTGATCAATTTTTGCAGATGGCAAAGCAACATTATGAAAAGACAAACACAGCAGAGGCTACTGGGGGTGCAGGCACGGGAAGCTCATCAACTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGCAAACCTTCTGATCACGCTCCAGTTGCTTCTGCGAGTTCTAGCGCCGTTACATCAACATCTTCTAATGCCAGCTCAGTTGTAGATACTCCTTCAACAGCACCCGTCCGTGTAAGTTCCACACCAGATTTCACTGAGCACCATGCCCCTCCATCTCCTACATCAACGGATGGTTGGGGGGAACTAGAGAATGGAATCGATGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATCTAGAACCACTTGAAGATACAAAGCCAGTTCCAGCTCTTACCAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCAGTTTCACATACAAAAGCTTCAAGTATACGCCCCAAAAGTACGCCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTGCCATAGCAGCTCCTGCTCCAAAAACATCAAAACCTTTAAATTTGAAATCAGCTGTAACTGATGATGATGATCCCTGGGCTGCCATTGCAGCTCCTGCGCCCACTACAAGGGCCAAGCCTTTATCATCTGGCAGAGGTCGGGGAGCCAAACCCGCTGCTCCAAAATTAGGTGCTCAGCGAATAAATCGGACATCATCGTCCGGGGTGTAA 2388 0.4422 MFKFLKDVVGGSGTGIKDLPYNIGEPYHSAWGSWIHHRGTSKDDGSPVSIFTLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGASKVTIYIVTEPVMPLSDKVKELGLESTQRDEYYAWGLLQISKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKAMELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKILPTIIKLFASNDRAVRVSLLQHIDQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEAAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDINEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQMAKQHYEKTNTAEATGGAGTGSSSTPGNASLLGWAMSSLTLKGKPSDHAPVASASSSAVTSTSSNASSVVDTPSTAPVRVSSTPDFTEHHAPPSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEDTKPVPALTNIQAAQRRPVSQPVSHTKASSIRPKSTPKLSKDEDDDLWGAIAAPAPKTSKPLNLKSAVTDDDDPWAAIAAPAPTTRAKPLSSGRGRGAKPAAPKLGAQRINRTSSSGV 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03806 795 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03806 795 MobiDBLite consensus disorder prediction 690 712 - -
Vivi7g03806 795 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Vivi7g03806 795 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 12 773 - -
Vivi7g03806 795 ProSiteProfiles HEAT repeat profile. 523 561 IPR021133 -
Vivi7g03806 795 MobiDBLite consensus disorder prediction 601 645 - -
Vivi7g03806 795 Gene3D - 282 562 IPR011989 -
Vivi7g03806 795 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03806 795 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Vivi7g03806 795 Pfam Protein tyrosine and serine/threonine kinase 46 237 IPR001245 GO:0004672|GO:0006468
Vivi7g03806 795 MobiDBLite consensus disorder prediction 655 672 - -
Vivi7g03806 795 MobiDBLite consensus disorder prediction 594 795 - -
Vivi7g03806 795 Gene3D Transferase(Phosphotransferase) domain 1 109 279 - -
Vivi7g03806 795 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Vivi7g03806 795 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03806 Vivi-Chr7 103956543 103969625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03806 70 291 MAP Kinase Kinase Kinase AT5G66850 23.932 4.08e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Vivi7g03806 PK_Tyr_Ser-Thr 2.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03806 K08876 - gmx:100792884 1332.39