Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03805 ATGGAGAATGTGGCTGATATCGATGACAAACCCACCATTGGTGGTGGTGTTCAGGATGTTTATGGTGAGGATAGAGCCACGGAGGATCAGAGTGTTACTCCTTGGAATGTTTCTGTGGCTAGTGGATACACTATGTTGAGAGATCCACAGTTCAATAAAGGACTAGCCTTCACCGAGAAAGAGAGGGATGCACACTACTTGCGTGGCCTTCTTCCCCCAACAGTTATTTGTCAAGAAACTCAGGTGAAGCAAATGATCAAAAACATAAGGCAATACGAAGTTCCATTACAGAAGTACATGGCGATGATGGATCTTCAGGAGACAAACGAAAGGCTATTTTACAGGCTTCTTATTGATCATGTTGAGGAGTTACTCCCGATTGTTTATACTCCAACCGTTGGTGAAGCTTGCCAGAAATATGGATCCATCTTCATTCGTCCTCAAGGTCTTTATATAAGTTTGAAAGAGAAAGGAAAGGTTCTTGAAGTACTTAGGAATTGGCCTGAGAAGAACGTTCAAGTCATTGTTGTAACTGACGGAGAGCGGATCTTAGGTCTCGGGGATCTTGGCTGTCAAGGGATGGGAATACCAGTAGGAAAGCTTTCTTTATACACTGCACTTGGCGGAGTCCGCCCTTCTTCCTGCTTGCCTATTACCATTGATGTGGGGACAAACAATGAGAAGTTGCTGGGTGAAGAGTTATACATAGGGCTCAAGCATACACGGGTAACTGGGCAGGAATATGCTGAACTTATTGATGAATTCATGACGGCAGCCAAGCAAAATTACGGAGAAAAACTCCTCATCCAGTTTGAAGACTTTGCAAACCACAATGCTTTCGATCTGCTTGAAAGATATAGGTCAACACATCTTGTTTTCAATGATGATATTCAGGGAACTGCATCAGTGGTCCTTGCAGGTGTTGTTTCGGCTCTGAAGTTGGTTGGGGGAAACTTGGGCGATCATCGGTTTTTATTCCTCGGTGCTGGAGAGGCAGGCACTGGAATAGCATCACTCATAGCACTCGAAATATCAAAACGAACAAATTCTCCGGTGGATGAAGTGCGCAAAAACATTTGGTTGGTGGACTCAAAGGGTTTGATTGTCAGTTCTCGCGAAGAATCACTTCAACATTTTAAGAAGCCGTGGGCTCATGATCACGAACCTGTTACAGAACTCGTGGATGCTGTTAATCAAATTAAGCCGACGGTGTTGATTGGTACATCAGGACAAGGACAAACTTTTACACAAGAAGTGGTCGAAGCGATGGCATCCCATAATGAGAAACCTATTATTCTCGCTCTTTCCAACCCGACAACTCAGTCAGAATGTACTGCTGAAGAAGCTTATACGTGGTCGAAGGGATGTGCCATTTTCGCCAGCGGTAGCCCATTTCCCTCAGTTGAATATGATGGAAAAGTTTTTGTACCTGGCCAGGCGAATAATGCATACATTTTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGTACCATCCGAGTGCACGATGACCTGCTTCTTGCAGCTTCTGAAGCTTTGGCTTCACAGGTGACTCAGGAGCACTATGACAAAGGACTCATATACCCGCCATTCACTAACATCAGAAAGATTTCAGCAAACATAGCTGCTCAAGTTGCTGCTAAGGCCTATGAGCTTGGTTTGGCCACTCGCCTTCCTCGACCAAAAAATTTGGTGAATTTTGCTGAGAGTTGTATGTATACTCCGACTTACAGAAACTACCGTTGA 1746 0.4427 MENVADIDDKPTIGGGVQDVYGEDRATEDQSVTPWNVSVASGYTMLRDPQFNKGLAFTEKERDAHYLRGLLPPTVICQETQVKQMIKNIRQYEVPLQKYMAMMDLQETNERLFYRLLIDHVEELLPIVYTPTVGEACQKYGSIFIRPQGLYISLKEKGKVLEVLRNWPEKNVQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLGEELYIGLKHTRVTGQEYAELIDEFMTAAKQNYGEKLLIQFEDFANHNAFDLLERYRSTHLVFNDDIQGTASVVLAGVVSALKLVGGNLGDHRFLFLGAGEAGTGIASLIALEISKRTNSPVDEVRKNIWLVDSKGLIVSSREESLQHFKKPWAHDHEPVTELVDAVNQIKPTVLIGTSGQGQTFTQEVVEAMASHNEKPIILALSNPTTQSECTAEEAYTWSKGCAIFASGSPFPSVEYDGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALASQVTQEHYDKGLIYPPFTNIRKISANIAAQVAAKAYELGLATRLPRPKNLVNFAESCMYTPTYRNYR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03805 581 Gene3D - 40 294 IPR037062 GO:0004471
Vivi7g03805 581 PANTHER MALIC ENZYME-RELATED 13 580 - -
Vivi7g03805 581 CDD NAD_bind_1_malic_enz 297 575 - -
Vivi7g03805 581 PIRSF ME 18 581 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 297 580 IPR036291 -
Vivi7g03805 581 SMART Malic_M_2 297 550 IPR012302 GO:0051287
Vivi7g03805 581 ProSitePatterns Malic enzymes signature. 293 309 IPR015884 GO:0004471
Vivi7g03805 581 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 20 296 IPR046346 -
Vivi7g03805 581 Pfam Malic enzyme, NAD binding domain 297 549 IPR012302 GO:0051287
Vivi7g03805 581 PRINTS Malic enzyme signature 172 201 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 PRINTS Malic enzyme signature 208 230 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 PRINTS Malic enzyme signature 427 443 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 PRINTS Malic enzyme signature 112 136 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 PRINTS Malic enzyme signature 268 286 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 PRINTS Malic enzyme signature 324 340 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 PRINTS Malic enzyme signature 293 309 IPR001891 GO:0004470|GO:0004471
Vivi7g03805 581 FunFam Malic enzyme 295 581 - -
Vivi7g03805 581 Gene3D - 295 581 - -
Vivi7g03805 581 FunFam Malic enzyme 40 294 - -
Vivi7g03805 581 SMART malic_2 106 287 IPR012301 GO:0004471
Vivi7g03805 581 Pfam Malic enzyme, N-terminal domain 106 287 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03805 Vivi-Chr7 103944420 103948721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03805 K00029 - gmx:100791514 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03805 7 103944420 103948721 Vivi7g03805 7 103944420 103948721 ECH
Vivi7g03805 7 103944420 103948721 Vivi2g07971 2 229567297 229572034 ECH
Vivi5g06289 5 169233234 169237665 Vivi7g03805 7 103944420 103948721 ECH
Vivi3g00265 3 4616794 4620647 Vivi7g03805 7 103944420 103948721 ECH
Vivi7g03805 7 103944420 103948721 Vivi3g00265 3 4616794 4620647 ECH
Vivi7g03805 7 103944420 103948721 Vivi1g04456 1 94940943 94942678 ECH
Vivi7g03805 7 103944420 103948721 Vivi7g04369 7 113504539 113507116 ECH
Vivi2g07971 2 229567297 229572034 Vivi7g03805 7 103944420 103948721 PCT