Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03795 ATGCTAAGATTCTCTCTTTTTGCACTAAACTCCACTTGTTTTAAACCTCTCTCAATTCCCTCGTATTGTGTTTCTGTTTATTCAACATTTCTCTCTCACTTTTTCAGCTTAAAAAAAAAGTTAGTTATGGGAAAAGCTAGTAGATGGTTGAAGAATTTCTTAGGAATGAAGAAGGAGAAGGAGAAAGAGAAAGAGAAGGAACATGTTGATGTTGATTTTAATTCAGGTTCATTGACACCTAATAAGACTAAGAAAGAGAAGAAAAGATGGAGTTTTGGAAAGCAAGGGAAGAGTTTAGATCCTAACATTGCTCCAACTTCAGCTTCTGATTCTGATTCTGCTTGGCTTAGATCCTATATGGCTGATACTGAGAATCAGCAGAACAAACATGCAATTGCTGTTGCGGCGGCCACGGCCGCCGCTGCGGATGCAGCGGTGGCCGCGGCGCAGGCTGCCGTGGCGGTTGTGAGGCTGACAAGTGGTAGAGGTACATTGTTTAGTGGAAGTAGAGAGAAATGGGGTGCTGTAAAGATCCAAACTTTCTTCAGAGGCTATTTGGCAAGAAAAGCTCTTAGAGCATTGAAAGGATTGGTGAAGATACAAGCACTTGTTAGAGGCTATCTTGTTAGAAAAAGAGCTGCTGCAACTCTTCATAGTATGCAAGCTTTAATTCGAGCTCAAACTTCGGTCAGAACGCAAAGGGCTCGTCGATCCATGAGCAAGGAAAATCGGTTTCTATCTGAAAATCTTGCAAGAAAATCTCTGGAACGATACGATGAAACACGGAGCGAATTCCACAGCAAAAGAGTACCAACATCTTATGAAACACCATTGAGTGGATTTGAAGAAAGTCCAAAGATTGTCGAAATCGACACATACAAAACCAAATCAAAATCTCGAAGATTCTCCTCAACAATGTCCGAATACGGAGAAGAATTACCACCGTGTCACGCAACAATTTCCTCACCTCTTCCAACCAGAATCTCACTTCCCGATCATCGAAACCATCAACAACAGCAAGACTTTGATTGGTATTTCAACAATCTCGAAGAGTGTCGTTACCCAACCACACATAACACGCCCCGTTTCAACCATTCGTCTTCAACGCTACCGCCAAACACACCATCAAAAAGTGTTTGTGGCGGCGAAACCACTTTCTATAGACCCTATTATTACTCGAATTTTCCGAATTACATGGCGAATACACAATCATTCAAGGCAAAGTTAAGGTCTCATAGTGCTCCTAAACAAAGGCCAGAAGTTAAGAAAAGGCTTTCACTCAATGAAATGATGGCTGCAAGAAACAGTTTAGGTAGTGTTAGAATGCAAAAGCCACAATCATCCAATTTACAGACACAACAAGAAGAAGAATCATGGAATTTTTGA 1386 0.4127 MLRFSLFALNSTCFKPLSIPSYCVSVYSTFLSHFFSLKKKLVMGKASRWLKNFLGMKKEKEKEKEKEHVDVDFNSGSLTPNKTKKEKKRWSFGKQGKSLDPNIAPTSASDSDSAWLRSYMADTENQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSGRGTLFSGSREKWGAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTSVRTQRARRSMSKENRFLSENLARKSLERYDETRSEFHSKRVPTSYETPLSGFEESPKIVEIDTYKTKSKSRRFSSTMSEYGEELPPCHATISSPLPTRISLPDHRNHQQQQDFDWYFNNLEECRYPTTHNTPRFNHSSSTLPPNTPSKSVCGGETTFYRPYYYSNFPNYMANTQSFKAKLRSHSAPKQRPEVKKRLSLNEMMAARNSLGSVRMQKPQSSNLQTQQEEESWNF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03795 461 ProSiteProfiles IQ motif profile. 195 222 IPR000048 GO:0005515
Vivi7g03795 461 SMART iq_5 193 214 IPR000048 GO:0005515
Vivi7g03795 461 SMART iq_5 170 192 IPR000048 GO:0005515
Vivi7g03795 461 Gene3D - 114 196 - -
Vivi7g03795 461 MobiDBLite consensus disorder prediction 65 97 - -
Vivi7g03795 461 PANTHER IQ-DOMAIN 5-RELATED 43 438 - -
Vivi7g03795 461 Pfam Protein of unknown function (DUF4005) 360 453 IPR025064 -
Vivi7g03795 461 Pfam IQ calmodulin-binding motif 174 192 IPR000048 GO:0005515
Vivi7g03795 461 Pfam IQ calmodulin-binding motif 198 212 IPR000048 GO:0005515
Vivi7g03795 461 ProSiteProfiles IQ motif profile. 171 199 IPR000048 GO:0005515
Vivi7g03795 461 MobiDBLite consensus disorder prediction 436 461 - -
Vivi7g03795 461 MobiDBLite consensus disorder prediction 439 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03795 Vivi-Chr7 103847839 103850422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03795 43 442 IQD Protein Family AT3G16490 53.155 2.08e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03795 - - vvo:131618118 853.203