Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03792 ATGGGAAAAGCTAGTAGATGGTTGAAGAATTTCTTAGGAATGAAGAAGGAGAAGGAGAAAGAGAAAGAGAAGGAACATGTTGATGTTGATTTTAATTCAGGTTCATTGACACCTAATAAGACTAAGAAAGAGAAGAAAAGATGGAGTTTTGGAAAGCAAGGGAAGAGTTTAGATCCTAACATTGCTCCAACTTCAGCTTCTGATTCTGATTCTGCTTGGCTTAGATCCTATATGGCTGATACTGAGAATCAGCAGAACAAACATGCAATTGCTGTTGCGGCGGCCACGGCCGCCGCTGCGGATGCAGCGGTGGCCGCGGCGCAGGCTGCCGTGGCGGTTGTGAGGCTGACAAGTGGTAGAGGTACATTGTTTAGTGGAAGTAGAGAGAAATGGGGTGCTGTAAAGATCCAAACTTTCTTCAGAGGCTATTTGGCAAGAAAAGCTCTTAGAGCATTGAAAGGATTGGTGAAGATACAAGCACTTGTTAGAGGCTATCTTGTTAGAAAAAGAGCTGCTGCAACTCTTCATAGTATGCAAGCTTTAATTCGAGCTCAAACTTCGGTCAGAACGCAAAGGGCTCGTCGATCCATGAGCAAGGAAAATCGGTTTCTATCTGAAAATCTTGCAAGAAAATCTCTGGAACGATACGATGAAACACGGAGCGAATTCCACAGCAAAAGAGTACCAACATCTTATGAAACACCATTGAGTGGATTTGAAGAAAGTCCAAAGATTGTCGAAATCGACACATACAAAACCAAATCAAAATCTCGAAGATTCTCCTCAACAATGTCCGAATACGGAGAAGAATTACCACCGTGTCACGCAACAATTTCCTCACCTCTTCCAACCAGAATCTCACTTCCCGATCATCGAAACCATCAACAACAGCAAGACTTTGATTGGTATTTCAACAATCTCGAAGAGTGTCGTTACCCAACCACACATAACACGCCCCGTTTCAACCATTCGTCTTCAACGCTACCGCCAAACACACCATCAAAAAGTGTTTGTGGCGGCGAAACCACTTTCTATAGACCCTATTATTACTCGAATTTTCCGAATTACATGGCGAATACACAATCATTCAAGGCAAAGTTAAGGTCTCATAGTGCTCCTAAACAAAGGCCAGAAGTTAAGAAAAGGCTTTCACTCAATGAAATGATGGCTGCAAGAAACAGTTTAGGTAGTGTTAGAATGCAAAAGCCACAATCATCCAATTTACAGACACAACAAGAAGAAGAATCATGGAATTTTTGA 1260 0.4222 MGKASRWLKNFLGMKKEKEKEKEKEHVDVDFNSGSLTPNKTKKEKKRWSFGKQGKSLDPNIAPTSASDSDSAWLRSYMADTENQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSGRGTLFSGSREKWGAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTSVRTQRARRSMSKENRFLSENLARKSLERYDETRSEFHSKRVPTSYETPLSGFEESPKIVEIDTYKTKSKSRRFSSTMSEYGEELPPCHATISSPLPTRISLPDHRNHQQQQDFDWYFNNLEECRYPTTHNTPRFNHSSSTLPPNTPSKSVCGGETTFYRPYYYSNFPNYMANTQSFKAKLRSHSAPKQRPEVKKRLSLNEMMAARNSLGSVRMQKPQSSNLQTQQEEESWNF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03792 419 Gene3D - 132 171 - -
Vivi7g03792 419 MobiDBLite consensus disorder prediction 15 66 - -
Vivi7g03792 419 MobiDBLite consensus disorder prediction 15 30 - -
Vivi7g03792 419 ProSiteProfiles IQ motif profile. 153 180 IPR000048 GO:0005515
Vivi7g03792 419 PANTHER IQ-DOMAIN 5-RELATED 1 396 - -
Vivi7g03792 419 SMART iq_5 151 172 IPR000048 GO:0005515
Vivi7g03792 419 SMART iq_5 128 150 IPR000048 GO:0005515
Vivi7g03792 419 ProSiteProfiles IQ motif profile. 129 157 IPR000048 GO:0005515
Vivi7g03792 419 MobiDBLite consensus disorder prediction 397 419 - -
Vivi7g03792 419 MobiDBLite consensus disorder prediction 394 419 - -
Vivi7g03792 419 Pfam IQ calmodulin-binding motif 132 150 IPR000048 GO:0005515
Vivi7g03792 419 Pfam IQ calmodulin-binding motif 156 170 IPR000048 GO:0005515
Vivi7g03792 419 Pfam Protein of unknown function (DUF4005) 318 411 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03792 Vivi-Chr7 103847839 103851170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03792 1 400 IQD Protein Family AT3G16490 53.155 2.98e-101 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03792 - - vvo:131618118 770