Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03725 ATGGACTACTTTTCGAACTCAATCGGTGAATTTTCATGGATTTGTTTGAAGAATTTTGATTTCAGTTCTTTATGTTCTCAGAGAAGCTTAATAGACATTATCAATATACTCTTTCTATGTGTCTACTACTTATCTTTGATTATCACATTCATCAGAAAAAGTTCTACGAACGAAAGCCAAAGAAAATGCTGGATTTTCCTTGTTGTTTCAATCTGTTGTGGTGTTATTAGCATTGCGTTTTTCGGTATTGGATTGTGGAATCTTGTAGCTGAAGTTGATGACTCTGAGCAAATGAAATGGTTAACTTGCGTTGTAAGAGGAATCATTTGGATTTCTTTTTCTGTTTCTTTGATTGTTCAGAGAGTTAAAGGGATAAGACTATTAAACTCTATATGGTGGCTATCTTCTTCTGTATTGGTTTCAGTTCTCAACATTGAAATTCTGTTACAAAATCATGCAGTTGAAACTTTTGATATTGTACAGTGGCTTGTGCATTTTCTTCTTCTATATTGTGCCTTCAAAAATCTAAGTTATTTAGGAAATAATAGTGTCCAAGAAGCTTTATCTGAGCCACTATTAGCGCAAAAAGTCGAAACAAAACAAACCGGACTAGGTCATGCTACTTTTCTCAGTAAGTTGATTTTCTCTTGGATTAATTCGTTACTCGGTTTAGGTTACTCAAAGCCACTAGATCTTGAAGAGATTCCTTCTCTTGTTTCTGAAGACGACGCAAACATGGCTTATCAAAAATTTGTGCATGCTTGGGAATCACTTGTTAGAGAGAGGACTAAGAATAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTAGAACTTACTTAAAAGAAAATATACTAATAGCGTTTTATGGATTAATCAGAACGATTTCTGTTGTAGTTTCGCCTCTAATACTCTATGCTTTTGTTAACTACTCATATAGAACTGAGGCAGATCTTAGAAAAGGTCTTTCCATAGTTGGTATTTTGATTGTCACCAAAGTGTGTGAGTCTTTGTTTCAAAGACATTGGTTTTTTAACTCAAGGAGGTCAGGAATGAAAATGAGATCAGCTCTGATGGTAGCAGTTTATCGAAAGCAGCTCAAGCTTTCAAGCTCGGCGAGGGCGCGACACTCGGCTGGGGAAATTGTGAATTACATTGCTGTTGATGCTTATAGAATGGGGGAATTTCCATGGTGGTTTCATATAGCATGGACTTCTGCATTGCAGCTTGTTCTTTCTATCGGTATCCTTTTCGGCGTTGTTGGTATCGGTGCTCTTCCCGGTTTGGTCCCTCTTCTTATATGTGGATTTCTCAATGTACCATTTGCAAGGATCCTACAAAATTGTCAGTCGCAGTTTATGATTGCACAAGACGAACGTCTTCGAACTACTTCGGAGATTCTAAATAGTATGAAGATCATTAAGTTACAATCATGGGAAGAGAAATTCAAGAACTTAGTCGAGTCTCTACGTGATAGAGAGTTCATATGGCTGTCTAAGGTGCAGATCTTGAATGCTTTTAGTTCATTTCTATATTGGATGTCTCCTACAGTTGTTTCTGCTGTTGTGTTCCTTGGATGTGCTGTTACCAAGAGTGCACCATTGAATGCTGAAACTATTTTCACAGTTCTTGCAACATTGAGGAACATGGGAGATCCTGTTAAAATGGTCCCACAGGCTCTATCCATTATGATTCAAGTTAAGGTTTCCTTCGATCGTCTTAATAACTTTTTGCTTGATGAAGAACTAAACAATGATGATAGTGAAAGGAAGCATAAGCAATGGTTGGTTAATGCTGTGGAAATTCAAGATGGAAACTTCATTTGGGATCATGGATCTGCGTCTCCAACTTTAGTAGATGTGAATTTAGAAATCAAATGGAGACATAAAATTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCGCTTTTGTATGCCATACTAGGAGAGATACCTAAGATCTCTGGAACTGTTAATGTAGGTGGCACTCTTGCATATGTTTCCCAATCTGCATGGATCCAAAGTGGAACGGTTCGAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATATGAGAAAGCAATCAAAGCTTGTGCCTTAGATAAGGATATCAATGATTTTAGCCATGGCGATCTTACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAACGATGCTGATATCTATCTTCTTGATGATCCTTTCAGTGCAGTTGATGCACATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTCTAAGAGAGAAAACGGTCATTCTTGTTACTCATCAAGTGGAGTTTCTATCAGAAGTTGATACTATCTTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCTTGACATCAGGAACGGCCTTTGAACTACTTGTGAGTGCTCATAATGATACAATTACAGAGTTGAATCAAGATAATGAAAATAAAAGAGGTTCTGAAATTGAGGTTTTGTCGTCTAATCCTCAAGACTCTAATGTTGGAGATATTTCTAGTCCAATTGGGGCACAGCTTACACAAGAGGAAGAAAAAATGGTTGGTAATGTTGGATGGAAGCCATTCTGGGATTATATTACATATTCCAAAGGGACACTCATGTTGTGTTTCATCATGTTAGTACAATCTGCTTTTCTGGCTTTCCAAACTGCATCAACCTTTTGGCTCGCTATAGCCATTGAAATTCCAAAAGTAACCAATGCCACCTTGATCGGAGTTTATGCATTAATTTCTTTTGCTAGTACCGCTTTTGTATTTGCAAGGTCTTACTTGACTGCACTTCTTGGACTAAAAGCTTCTACTGCTTTCTTCTCAAGCTTCACTACAGCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACGCCCGTGGGAAGGATTTTAACCAGAGCTTCATCTGATTTGAGTATTTTGGACTTCGATATACCTCCTTCCATCACCTTTGTAGCATCTGTAGCAATTGAAGTTTTGGTGGTTATTTCAATAATGGCTTCAATCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAATATACTTTCAGCAATATTATCAAGCCACTGCAAGGGAACTGATACGGATCAACGGAACAACCAAAGCTCCAGTCATGAATTTTGCAGCCGAGACATCACTTGGAGTGGTCACTGTAAGAGCATACAGCATGGTGGACAGATTTTTCCAAAACTACTTAACACTTGTGAACACAGATGCTTCATTGTTCTTTCATTCCAATGCTGCAATGGAATGGGTAGTTTTAAGGATTGAAGCACTTCAAAGTTTGACTGTCATCACTGCATCTTTGTTGATCATTCTACTTCCTCACGGATACGTATCCCCAGGGCTTGTGGGAGTGTCTCTTTCCTATGCTTTTAGCTTGACAGAAGCTCAAATATTTTGGAGTAGATGGTTTTCCAACTTATCTAACTATATTGTCTCCGTTGAAAGAATCAAGCAATTCATTTATATACCAGCAGAGCCTCCTGCTATTGTGGATAGTAACCGGCCGCCATCTTCATGGCCTTCGAAGGGCAAGATTGATCTTCAAGGCTTAGAGATTAGATACCGTCCTAATGCTCCATTAGTCCTCAAGGGAATCACTTGTACATTTAAAGAAGGGAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTCCGCTTAGTTGAGCCTTCACGAGGTGATATTCTTATTGATGGGATGAACATCTGCTCAATGGGGTTGAAGGATTTGAGAATGAGGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAAGGCAGCATTAGGACAAATCTGGATCCTCTAGGCCTGTACTCTGATGACGAAATATGGAAGGCTGTGGAAAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCAGTGAGCGATGAAGGTGGAAACTGGAGCTTGGGACAAAGACAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACCGAATTCTTGTTCTGGACGAAGCTACGGCCTCCATTGACTCTGCTACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACAGTTATAACGGTTGCTCATAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTCTCTTATGGGAAAGTGGTGGAATATGATGAGCCTTCAAAGCTAATGGACACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCTGCAAGAAGAATTCATTCCCAAATATTAGTAGGCAGCAACAATGA 4383 0.3897 MDYFSNSIGEFSWICLKNFDFSSLCSQRSLIDIINILFLCVYYLSLIITFIRKSSTNESQRKCWIFLVVSICCGVISIAFFGIGLWNLVAEVDDSEQMKWLTCVVRGIIWISFSVSLIVQRVKGIRLLNSIWWLSSSVLVSVLNIEILLQNHAVETFDIVQWLVHFLLLYCAFKNLSYLGNNSVQEALSEPLLAQKVETKQTGLGHATFLSKLIFSWINSLLGLGYSKPLDLEEIPSLVSEDDANMAYQKFVHAWESLVRERTKNNTKSLVLWSIVRTYLKENILIAFYGLIRTISVVVSPLILYAFVNYSYRTEADLRKGLSIVGILIVTKVCESLFQRHWFFNSRRSGMKMRSALMVAVYRKQLKLSSSARARHSAGEIVNYIAVDAYRMGEFPWWFHIAWTSALQLVLSIGILFGVVGIGALPGLVPLLICGFLNVPFARILQNCQSQFMIAQDERLRTTSEILNSMKIIKLQSWEEKFKNLVESLRDREFIWLSKVQILNAFSSFLYWMSPTVVSAVVFLGCAVTKSAPLNAETIFTVLATLRNMGDPVKMVPQALSIMIQVKVSFDRLNNFLLDEELNNDDSERKHKQWLVNAVEIQDGNFIWDHGSASPTLVDVNLEIKWRHKIAVCGPVGAGKSSLLYAILGEIPKISGTVNVGGTLAYVSQSAWIQSGTVRDNILFGKPMDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVIQSGSYENLLTSGTAFELLVSAHNDTITELNQDNENKRGSEIEVLSSNPQDSNVGDISSPIGAQLTQEEEKMVGNVGWKPFWDYITYSKGTLMLCFIMLVQSAFLAFQTASTFWLAIAIEIPKVTNATLIGVYALISFASTAFVFARSYLTALLGLKASTAFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPPSITFVASVAIEVLVVISIMASITWQVLIVAVPAMVASIYFQQYYQATARELIRINGTTKAPVMNFAAETSLGVVTVRAYSMVDRFFQNYLTLVNTDASLFFHSNAAMEWVVLRIEALQSLTVITASLLIILLPHGYVSPGLVGVSLSYAFSLTEAQIFWSRWFSNLSNYIVSVERIKQFIYIPAEPPAIVDSNRPPSSWPSKGKIDLQGLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGMNICSMGLKDLRMRLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDEPSKLMDTNSSFSKLVAEYWSSCKKNSFPNISRQQQ 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03725 1460 FunFam ABC transporter C family member 10 267 581 - -
Vivi7g03725 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 896 1158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03725 1460 Pfam ABC transporter transmembrane region 317 545 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03725 1460 Pfam ABC transporter transmembrane region 893 1155 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03725 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1198 1441 IPR027417 -
Vivi7g03725 1460 ProSitePatterns ABC transporters family signature. 724 738 IPR017871 GO:0005524|GO:0016887
Vivi7g03725 1460 CDD ABCC_MRP_domain2 1206 1426 - -
Vivi7g03725 1460 CDD ABCC_MRP_domain1 599 799 - -
Vivi7g03725 1460 SUPERFAMILY ABC transporter transmembrane region 272 579 IPR036640 GO:0005524|GO:0016020
Vivi7g03725 1460 Gene3D - 605 848 IPR027417 -
Vivi7g03725 1460 FunFam Multidrug resistance protein associated1 578 842 - -
Vivi7g03725 1460 CDD ABC_6TM_ABCC_D1 285 573 IPR044746 GO:0140359
Vivi7g03725 1460 Pfam ABC transporter 619 751 IPR003439 GO:0005524
Vivi7g03725 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 565 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03725 1460 SUPERFAMILY ABC transporter transmembrane region 879 1190 IPR036640 GO:0005524|GO:0016020
Vivi7g03725 1460 Gene3D - 1191 1442 IPR027417 -
Vivi7g03725 1460 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 206 1444 - -
Vivi7g03725 1460 Gene3D ABC transporter type 1, transmembrane domain 259 581 IPR036640 GO:0005524|GO:0016020
Vivi7g03725 1460 Gene3D ABC transporter type 1, transmembrane domain 861 1188 IPR036640 GO:0005524|GO:0016020
Vivi7g03725 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 599 822 IPR003439 GO:0005524
Vivi7g03725 1460 FunFam ABC transporter C family member 5 859 1189 - -
Vivi7g03725 1460 SMART AAA_5 1234 1427 IPR003593 GO:0016887
Vivi7g03725 1460 SMART AAA_5 626 799 IPR003593 GO:0016887
Vivi7g03725 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 820 IPR027417 -
Vivi7g03725 1460 FunFam ABC transporter C family member 3 1191 1442 - -
Vivi7g03725 1460 Pfam ABC transporter 1225 1373 IPR003439 GO:0005524
Vivi7g03725 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1210 1442 IPR003439 GO:0005524
Vivi7g03725 1460 CDD ABC_6TM_ABCC_D2 890 1183 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03725 Vivi-Chr7 103198276 103204288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03725 599 813 Calmodulin-binding Proteins AT2G36910 27.074 1.19e-18 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03725 - - gmx:100784827 2231.83