Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03724 ATGTCTTACTTTGAGAACTCAATAGGTGAAATTTCAGAGCCATTGCTAGCTCAAAAAGTTGAAACAAAACAAACAGAACTAAGGCATGCTACTTTTCTCAGTAAATTGATTTTCTCTTGGATTAATTCTTTACTCACTTTAGGTTACTCAAAACCACTCATTCTTGAAGACATACCTTCCCTTGTTTCTGATGATGAGGCTAACATGGCCTATCAAAATTTTGTCAAATCTTGGGAATCACTTGTAAGAGAGAGGACTAAGAACAATGCAAAGAGTTTGGTTCTTTGGTCTATAGTTAGAACTTTCTTAAAAGAAAACATATTAATAGCATTTTATGCATTAATCAGAACTATTTCTGTTGCAGTTTCACCTCTGATACTATATACTTTTGTTAACTACTCAAATAGAACTGAGGTAGATCTTAGAAAAGGTCTTTCCATAGTTGGTATTTTGATTCTCACCAAAGTCTTTGAGTCTTTGTCTCAAAGACATTGGTTTTTTAACTCAAGGAGGTCAGGAATGAAAATGAGATCAGCTCTGATGGTGGCAGTTTATCGAAAGCAGCTCAAGCTTTCTAGTTCGGCTAGGACGAGACACTCGGCCGGCGAAATTGTGAATTACATTGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATTTAACATGGACTTGTGCATTGCAACTTGTTGTTTCCATTGTTATCCTTTTTGGTGTTGTAGGTATTGGTGCTATTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCAAGGATCCTGCAAAATTGTCAGTCACAGTTTATGATTGCACAGGACGAACGTCTTCGATCCACTTCGGAGATTCTAAATAGTATGAAGATCATTAAGTTACAATCATGGGAAGAAAAATTCAAGAACTTAGTCTATTCATTACGCGATAAAGAGTTTGTATGGTTGTCTAAGGCACAGAAACTGAAAGCTTTTGGATCATTTCTTTATTGGATGTCTCCTACAATGATATCTGCTGTTGTTTTCCTCGGATGCGCAATTTCCAGGAGTGCACCATTGAATGCTGAAACAATTTTCACAGTTCTTGCAACATTGAGGAACATGGCGGAACCCGTTAGAATGATCCCTGAGGCTCTATCCATTATGATTCAAGTTAAGGTTTCCTTTGACCGTCTCAATAACTTTTTGCTTGATGAAGAACTAAACAAAGATGATAGTGACAGAAACTTCAAGCAATGTTCGGGTAATGCTGTGGAAATTCAAGATGGCAACTTCATTTGGGATCATGAATCAATGTCTCCAACTTTAACACATGTGAATTTAGAAATCAGATGCGGACAAAAAATAGCGGTTTGTGGACCAGTTGGTGCTGGAAAATCATCACTTTTGTATGCAATACTTGGACAGATTCCCAAGATTTCAGGAACTGTTAATGTAGGTGGCAAGCTTGCCTATGTTTCTCAATCTTCATGGATACAAAGTGGAACAGTTCAAGATAATATACTCTTTGGCAAGCCAATATTGGACAAAACAAGATATGAGAAAGCAATCAAAGCTTGTGCCTTAGATAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATTGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCAGATATCTATCTTCTCGATGATCCTTTCAGTGCAGTTGACGCACATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTTTAGGAGCGAAAACTGTCATTCTAGTTACTCATCAAGTGGAATTTCTTTCAGAAGTTGATACTATCTTGGTAATGGAGAGTGGAAAAGTTATTCAATCAGGTCGTTATGAAAATCTCCTGACGGCTGGAACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGACACAATCGCTGAGTTGAATCAAGATAATGAAAATAAAAGAGATTATAAAAATGAGGTTTCGTCTAATCCTCAAGACTCTCTAGGTTTTCATCTCACTAAAGATCCAAATGAGGGAGATAGTTCTAGTATCAAGGGTCCAATTGGTGTACAACTTACACAAGAGGAAGAAAAAGTAACTGGTGATGCTGGATGGAAGCCATTTTGGGATTATATCAATTATTCCAAAGGGTCATTCATGCTATGTTTGATAGTGTTAGCACAGTCTGTTTTTATAGCTTTGCAAACTGCATCCACCTTTTGGCTTGCTATAGCCATTAAAATTCCAAAAGTAACTAATGCCACCTTGATTGGAGTTTATGCATCAATTTCTTTTGCTAGTTCTGCTTTTATTTATGTAAGAACTTACTTGACTGCGCTTTTGGGATTAAAAGCTTCTACTGTTTTCTTCTCAAGCTTCACCACAGCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACTCCTGTAGGAAGGATTTTAACTAGAGCTTCGTCAGATTTGAGTATTTTGGACTTCGATGTACCTTATTCCATCACCTTTGTAGCATCTATATCAATTGAAATTTTGGTGGTTATTTCTATAATGGCTTCTGTCACATGGCAAGTTCTTATTGTGGCTGTTCCTGCAATAGTTGCATCAATATTCATTCAGAAATATTATCAAGCCACTGCAAGGGAACTAATTCGGATCAACGGAACCACCAAAGCTCCAATCATGAATTTTGCAGCAGAGACATCACTTGGAGTGGTCACTGTAAGAGCATACAACATGGCAGACAGATTTTTCAAAAACTACTTAACACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCCAATGTGGCAATGGAATGGGTAGTTTTAAGAATTGAAGCAGTTCAAAACTTGACTGTCATCACTGCAGCTTTGTTGCTTATTCTTCTTCCTCAAGGATATGTATCGCCAGGCCTTGTCGGACTGTCTCTTTCCTATGCTTTTACTTTGACAGGAGCACAAATATTTTGGACTAGATTGTTTTCCAACTTATCAAACTACATTATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCCGAGCCGCCTGCCACTGTGGAGGATAACCAACCGCCATCTTCATGGCCTTCTAAGGGCAAGATTGAACTTCAAGGCCTGGAGGTTAGGTATCGCCCTAACGCTCCATTAGTCCTTAAGGGAATTACTTGTACATTTAAAGAAGGGAGTAGGGTTGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGTGGTGATATTCTCATTGATGGGATTAACATTTGTTCAATGGGGTTGAAGGATTTGAGAACGAGGCTAAGCATAATCCCTCAAGAACCAACTCTATTCAAGGGAAGCATTAGGACAAACCTGGACCCTCTAGACATGTACTCAGATGATGAAATATGGAAGGCTGTAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCGGTGAGTGATGAAGGGGGAAACTGGAGCTTGGGACAAAGACAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACCGAATTCTTGTTTTGGATGAAGCTACAGCCTCCATTGACTCTGCTACAGATGCAATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGTACAGTTATAACGGTTGCTCATAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTCTCTTATGGGAAAGTGGTGGAATATGACGAGCCTTCAAAGCTAATGGACACCAACTCTTCATTCTCTAAACTGGTAGCTGAATATTGGTCCAGTTGCAGCAGGAAGAGTTCATTCCCAAACATTAGAAGACAGCAACAATGA 3891 0.386 MSYFENSIGEISEPLLAQKVETKQTELRHATFLSKLIFSWINSLLTLGYSKPLILEDIPSLVSDDEANMAYQNFVKSWESLVRERTKNNAKSLVLWSIVRTFLKENILIAFYALIRTISVAVSPLILYTFVNYSNRTEVDLRKGLSIVGILILTKVFESLSQRHWFFNSRRSGMKMRSALMVAVYRKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHLTWTCALQLVVSIVILFGVVGIGAIPGLVPLLICGLLNVPFARILQNCQSQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLVYSLRDKEFVWLSKAQKLKAFGSFLYWMSPTMISAVVFLGCAISRSAPLNAETIFTVLATLRNMAEPVRMIPEALSIMIQVKVSFDRLNNFLLDEELNKDDSDRNFKQCSGNAVEIQDGNFIWDHESMSPTLTHVNLEIRCGQKIAVCGPVGAGKSSLLYAILGQIPKISGTVNVGGKLAYVSQSSWIQSGTVQDNILFGKPILDKTRYEKAIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALGAKTVILVTHQVEFLSEVDTILVMESGKVIQSGRYENLLTAGTAFELLVSAHKDTIAELNQDNENKRDYKNEVSSNPQDSLGFHLTKDPNEGDSSSIKGPIGVQLTQEEEKVTGDAGWKPFWDYINYSKGSFMLCLIVLAQSVFIALQTASTFWLAIAIKIPKVTNATLIGVYASISFASSAFIYVRTYLTALLGLKASTVFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDVPYSITFVASISIEILVVISIMASVTWQVLIVAVPAIVASIFIQKYYQATARELIRINGTTKAPIMNFAAETSLGVVTVRAYNMADRFFKNYLTLVDTDASLFFHSNVAMEWVVLRIEAVQNLTVITAALLLILLPQGYVSPGLVGLSLSYAFTLTGAQIFWTRLFSNLSNYIISVERIKQFIHIPAEPPATVEDNQPPSSWPSKGKIELQGLEVRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSSGDILIDGINICSMGLKDLRTRLSIIPQEPTLFKGSIRTNLDPLDMYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDEPSKLMDTNSSFSKLVAEYWSSCSRKSSFPNIRRQQQ 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03724 1296 FunFam Multidrug resistance protein associated1 401 666 - -
Vivi7g03724 1296 FunFam ABC transporter C family member 10 90 404 - -
Vivi7g03724 1296 Gene3D - 1026 1277 IPR027417 -
Vivi7g03724 1296 Gene3D ABC transporter type 1, transmembrane domain 697 1024 IPR036640 GO:0005524|GO:0016020
Vivi7g03724 1296 Gene3D ABC transporter type 1, transmembrane domain 81 404 IPR036640 GO:0005524|GO:0016020
Vivi7g03724 1296 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 28 1279 - -
Vivi7g03724 1296 SUPERFAMILY ABC transporter transmembrane region 95 402 IPR036640 GO:0005524|GO:0016020
Vivi7g03724 1296 MobiDBLite consensus disorder prediction 656 695 - -
Vivi7g03724 1296 Pfam ABC transporter 440 575 IPR003439 GO:0005524
Vivi7g03724 1296 Pfam ABC transporter transmembrane region 737 993 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03724 1296 Pfam ABC transporter transmembrane region 109 368 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03724 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 643 IPR027417 -
Vivi7g03724 1296 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 731 1006 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03724 1296 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 388 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g03724 1296 CDD ABCC_MRP_domain2 1041 1261 - -
Vivi7g03724 1296 ProSitePatterns ABC transporters family signature. 548 562 IPR017871 GO:0005524|GO:0016887
Vivi7g03724 1296 FunFam ABC transporter C family member 3 1026 1277 - -
Vivi7g03724 1296 MobiDBLite consensus disorder prediction 669 695 - -
Vivi7g03724 1296 Pfam ABC transporter 1060 1208 IPR003439 GO:0005524
Vivi7g03724 1296 FunFam ABC transporter C family member 5 695 1024 - -
Vivi7g03724 1296 SMART AAA_5 1069 1262 IPR003593 GO:0016887
Vivi7g03724 1296 SMART AAA_5 449 631 IPR003593 GO:0016887
Vivi7g03724 1296 CDD ABCC_MRP_domain1 422 623 - -
Vivi7g03724 1296 Gene3D - 429 675 IPR027417 -
Vivi7g03724 1296 CDD ABC_6TM_ABCC_D2 725 1018 IPR044726 GO:0140359
Vivi7g03724 1296 CDD ABC_6TM_ABCC_D1 108 396 IPR044746 GO:0140359
Vivi7g03724 1296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1045 1277 IPR003439 GO:0005524
Vivi7g03724 1296 SUPERFAMILY ABC transporter transmembrane region 714 1025 IPR036640 GO:0005524|GO:0016020
Vivi7g03724 1296 Coils Coil 647 667 - -
Vivi7g03724 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1032 1276 IPR027417 -
Vivi7g03724 1296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 646 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03724 Vivi-Chr7 103184614 103189644 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03724 422 670 Calmodulin-binding Proteins AT2G36910 25.746 2.31e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03724 - - gmx:100784827 2004.56