Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03713 ATGGAGGAAACGCCCACACTCCTTCATGGAACAATTGAAGCTACCATCTTTAAGGCCTCACCTTACACACCATTTCCCCTCTTCAACTGCATATGTACAAATGGAAAGCCTGCATATGTGACCATCAAGATAGACAACAAAAAGGTTGCGAAAACAAGCAAAGAAAGAAACCGTATTTGGAACCAAACCTTTCACATTCAATGTGCTCATCCAGCTGATTCAGTTATCACCATTACATTGAAAACTTCAAATTCCAAGTTAGGAAAATACAGTATCAAAGCCCAACAACTTTTAAATGAAGCAAGTATAATCAACGGATTCTTCCCTCTCCTCGCGGAAAATGAAAAACCAAACCCGAAACTTAAGTTGAAGTTTATATTATGGTTCAAGCCTGCAAAGTTGGAAGAGAGTTTGGCAAAAGTACTAAGCAATGAGGAATTTCAAGGGCTAAAGGATGCAAAATTTCCACAAAGGTTTAATTGTCAAGTCAAACTTTATCATGATGCTCATCATTCTCCTACCTTTCAACCTCCCTTTGATCCATGTGGTACTCCAAACAACCTATGGGAGGATATCTATAAGGCCATTGAAGGTGCAAAGCATATAGTTTATATTGCAGCTTGGTCCCTCAATCCCAATATAGTTTTGGTAAGAGATCCTCATACAAAAATCCAACATGCAAGAGGAATGAGTTTAGGTGAGCTGTTGAAAAAGAAGGCAGATGAAGGAGTGGCTGTGAGACTTATGCTTTGGGATGATGAAGCATCATTGGCCTTAGTTAAGAACAAAGGTGTAATGAAAACACAAGATGAGGATGCTCTTACTTATTTCAATCACACACAAGTAATTTGCGAAAAGTGTCCTAGATTACACCACAAGTTTCCAACACTATTTGCTCACAATCAGAACACTATAACAGTTGACATAAAAGTGGCTAAATCGGTTAGCGATAGAGAGATTATGAGCTTTGTTGGTGGTTTAGATTTGTGTGCTGGTAGATATGATACAGAACAGCATTCATTGTTTCAAACACTCATTAAGGAATCACATTGTTATGACTTTTACCAACCAAACATTGAAGGAGCTAGCCTTAACAAAGGAGGACCAAGAGTGCCTTGGCATGATGCGCATGCTTGTGTTATCGGTGAAGCTGCCTGGGATGTCTTAACAAATTTTGAGCAAAGATGGACCAAGCAATGTGATCCCTCTCTTCTAGTCCCTACTAGCACCTTGGTAAATATCATGCCTCGAAGAAACTCAAACACTTCGAAAGAAAGTAATTGGAAAGTTCAAGTTTATAGGTCGATTGATCATGCTTCTGTTGGTGATTTCTGTGGAAATTTCACTGCGGAGAAGAGTATCCATGATGCTTATGTTGAAGCAATTAGGCATGCTGAGAGGTTTATATACATTGAAAACGAATACTTCATAGGTGGATGCCAATGGTGGGGAAAAGATAAGCATTGCGGTTGCACGAATCTAATTCCAATTGAAATTGCATTAAAAGTGGTAAGTAAGATCAAAGCAAAGGAAAGATTTGCAGCATATATAGTTATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAATCTGTTCAAGATATACTGCATTGGACTAGAGAAACTGTGGCAGTGATGTATAGGTTGATTGGTGAAGCATTGAAAGAAAGTGGTGAAATAGGACATCCAAGAGACTATTTGAATTTCTTTTGTCTTGCAAATAGAGAGAATAAGGGAAAAGGGGAGTATCTTCCACTGGATTCTCCCCATCCTAATACACAATACTGGCATGCACAAAAAAATAGAAGATTCATGGTTTATGTACATTCCAAGCTCATGATAGTGGATGACATGTACATATTACTAGGTTCAGCTAACATGAATCAAAGATCCATGGATGGGAAAGGGGACACTGAGATTGCCATAGGATGCTTCCAATCTCAAGATGAAGTTAAGAAACAAATGAACCTTGGTGATGTTCATGCATACAGAATGTCTTTATGGTATGAGCACACAAATAGTTTCAATGAATTGTTCTTGGAGCCACAAAGTTTGGAATGTGTGAAGAGGATGTGTTCCATTGGAGATCAAATGTGGGAAATCTTCAGCAGTGAAGAAATTGTAGACATGGAAGGTGTGCACCTTGTTACTTACCCAATGAGAGTAACTCAAGAAGGGTATGTGAAAGACTTGAGTAATGGAGTTTATTTTCCTGATACAAACTCTCTAGTGAAGGGGAAGAGATCTACATTGCCCCCTAATATAATGGCACCACCAAATGATGAAATTCATGAAGAGATACTTGAAGGCCTAAATGAAGAGGAAGAGGAAGATCCAATCCCTAAACCAAGGGCCAAGAGAAACACTAACAAGCCCAAACATTTTGAGAATTATGTGATGCCAAAATGTAAGAAAGGGGGTAGGAAGTAG 2430 0.3893 MEETPTLLHGTIEATIFKASPYTPFPLFNCICTNGKPAYVTIKIDNKKVAKTSKERNRIWNQTFHIQCAHPADSVITITLKTSNSKLGKYSIKAQQLLNEASIINGFFPLLAENEKPNPKLKLKFILWFKPAKLEESLAKVLSNEEFQGLKDAKFPQRFNCQVKLYHDAHHSPTFQPPFDPCGTPNNLWEDIYKAIEGAKHIVYIAAWSLNPNIVLVRDPHTKIQHARGMSLGELLKKKADEGVAVRLMLWDDEASLALVKNKGVMKTQDEDALTYFNHTQVICEKCPRLHHKFPTLFAHNQNTITVDIKVAKSVSDREIMSFVGGLDLCAGRYDTEQHSLFQTLIKESHCYDFYQPNIEGASLNKGGPRVPWHDAHACVIGEAAWDVLTNFEQRWTKQCDPSLLVPTSTLVNIMPRRNSNTSKESNWKVQVYRSIDHASVGDFCGNFTAEKSIHDAYVEAIRHAERFIYIENEYFIGGCQWWGKDKHCGCTNLIPIEIALKVVSKIKAKERFAAYIVIPMWPEGVPESESVQDILHWTRETVAVMYRLIGEALKESGEIGHPRDYLNFFCLANRENKGKGEYLPLDSPHPNTQYWHAQKNRRFMVYVHSKLMIVDDMYILLGSANMNQRSMDGKGDTEIAIGCFQSQDEVKKQMNLGDVHAYRMSLWYEHTNSFNELFLEPQSLECVKRMCSIGDQMWEIFSSEEIVDMEGVHLVTYPMRVTQEGYVKDLSNGVYFPDTNSLVKGKRSTLPPNIMAPPNDEIHEEILEGLNEEEEEDPIPKPRAKRNTNKPKHFENYVMPKCKKGGRK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03713 809 SUPERFAMILY Phospholipase D/nuclease 423 688 - -
Vivi7g03713 809 MobiDBLite consensus disorder prediction 767 809 - -
Vivi7g03713 809 MobiDBLite consensus disorder prediction 777 803 - -
Vivi7g03713 809 PANTHER PHOSPHOLIPASE D 6 740 IPR015679 -
Vivi7g03713 809 Pfam C2 domain 38 109 IPR000008 -
Vivi7g03713 809 SMART pld_4 604 631 IPR001736 GO:0003824
Vivi7g03713 809 SMART pld_4 296 333 IPR001736 GO:0003824
Vivi7g03713 809 Gene3D Endonuclease Chain A 174 429 - -
Vivi7g03713 809 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 125 IPR035892 -
Vivi7g03713 809 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Vivi7g03713 809 PIRSF PLD_plant 3 757 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vivi7g03713 809 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Vivi7g03713 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Vivi7g03713 809 Gene3D C2 domain 32 129 IPR035892 -
Vivi7g03713 809 Gene3D Endonuclease Chain A 446 657 - -
Vivi7g03713 809 SUPERFAMILY Phospholipase D/nuclease 147 407 - -
Vivi7g03713 809 Pfam Phospholipase D C terminal 677 747 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03713 Vivi-Chr7 103065753 103069349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03713 30 757 Phospholipase D Gene Family (Wang group) AT1G55180 59.811 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03713 K01115 - gmx:100812642 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g03713 7 103065753 103069349 Vivi7g03713 7 103065753 103069349 ECH
Vivi2g07312 2 217049941 217053214 Vivi7g03713 7 103065753 103069349 PCT