Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03683 ATGTATTTTTTTACGCCAAGAAGCCAGAAATATGAAAATGGACAATGTCCTGATCGAGTGGTTGAAAACCATGGTTTTTGGAAAGCTACTGGAAAAGAAAATGCAGTGATGGATAATTATATTGAAATTGGATTCAAAAGAACATTAGTGTTTTACAATGGTAAACAAGGAAAGGCTAAAGAGTTGGATGATTATCAGACATTGCTTGTACGATTTCTGAACATTAATCCTCAGTATACTTTGAGACCGGGTGAGCCGCTTCATTCAGATGTGAACTTTATATTTGGAGTGAAGTCATTGGCGGAAAGGGGTCTAACAGAACTCTATATCAAACAACAAGAAACCGTAAGACAATTGGCGGTAAATGAGACGAGACGCGAGGCGGCGGAACATGAGGCGGCTTTGAAGACCCAAATGGAGGCAATGCAGAGCAAGTATCAGCGGCAAATGAAGGTCATGGTGAAGAGGCAATATGATATGAAGGCGCAAATGCGGCAATTTATGCAATCGTTTGGTGGAAACCAAAACGTGGGTAGTTATGCGCCGACGGATCAAGAGAACGAAAATGATGATAACTTTCTCGACCCTGACTGA 594 0.4125 MYFFTPRSQKYENGQCPDRVVENHGFWKATGKENAVMDNYIEIGFKRTLVFYNGKQGKAKELDDYQTLLVRFLNINPQYTLRPGEPLHSDVNFIFGVKSLAERGLTELYIKQQETVRQLAVNETRREAAEHEAALKTQMEAMQSKYQRQMKVMVKRQYDMKAQMRQFMQSFGGNQNVGSYAPTDQENENDDNFLDPD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03683 197 Coils Coil 121 141 - -
Vivi7g03683 197 Gene3D NAC domain 1 65 IPR036093 GO:0003677|GO:0006355
Vivi7g03683 197 Pfam No apical meristem (NAM) protein 1 58 IPR003441 GO:0003677|GO:0006355
Vivi7g03683 197 MobiDBLite consensus disorder prediction 173 197 - -
Vivi7g03683 197 SUPERFAMILY NAC domain 2 59 IPR036093 GO:0003677|GO:0006355
Vivi7g03683 197 PANTHER NAC TRANSCRIPTION FACTOR 56 1 60 - -
Vivi7g03683 197 ProSiteProfiles NAC domain profile. 1 111 IPR003441 GO:0003677|GO:0006355
Vivi7g03683 197 MobiDBLite consensus disorder prediction 173 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03683 Vivi-Chr7 102739181 102740241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03683 2 63 NAC Transcription Factor Family AT1G69490 43.548 1.45e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi7g03683 NAM 3.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03683 - - vvo:131619878 395.201