Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03662 ATGTCAAGCTCTCACAAAAAGAACGATGTGTTCATTAGCTTTAGAGGTGAAGATACCCGTGAAACCTTCACAAGCCATCTCTATGATGCACTCAAGAAAGAAAAAATCGAAACATACATTGACTACAAACTTCAAAAAGGAGATCAAGTTTGGTGTGAACTCGTCAAAGCAATTCAACATTCAACTGTGTCTATCGTTGTGTTTTCAGAAAACTATGCTTCCTCGAAGTGGTGTTTGGATGAACTTGTTCAAATACTTGAATGTAGAAAAAATAACGGTCAAGTAGTTATACCAGTGTTTTATAGAGTAGATCCATCACATATTCGTCATCAGAAAGAGAGTTATGAGAGAGCATTTGCAAAATATGAGAGAGAGATTAGGAATGATGAATCTCATGAAGAGAAAGTGTTGGGTTGGAAAGCTGCACTCAGAGAAGCTGCTAATATTTCTGGATGGGATTCATCTACTTTCAAGGATGATTCTCATATCATCGAGAATATTGTGAGAGATGTTTGCCAGAAGTTGACCCTGATGTATCCTAAGGTCTTGAAAGGCATTCAAATTGATGAAAACAGTAAACATGTTGATTTATTAGTGAAAAAAGTTTCAAGAATTGGAATATGGGGTATGGGTGGCATAGGAAAGACAACCATAGCAAGACTCATGTTTGTGAAAAACATTGCAAAATATGACAGTGTATGCTTCATGGAAAAGGTAAAAGAAGAATCAGAAAAGCTCGGACTAACACAAGTACGTAATAATATTTTCAGTGAGCTACTAAAGAGACAGATTACTGCATCTGATGTTATTGGATACACATTCATTAAGAGGAGGCTCAGTGGTAGAAAAGTTTTCATTGTACTTGATAATGTGGGTAATGCTGCACAATTAGATTATTTGTGTGGAGAACTTGATGAACTTGGACTAAACAGTAGACTCATTATCACAACAAGAGATAGGCACACACTCAGGGGAAGAGTTGATGCTATACACGAGGTTAAAAAATGGAACTTCGAAGAATCTTTAAATCTTTTTATATTTGAAGCCTTCAAGCAAAGCTGTGCCCAAAAGGGTTACGAGGGTCTTTTGGAAAGGGCTGTTGAATATGCAGGAGGTGTTCCATTAGCTTTGAAAGTTTTAGGTTCTCATTTTCATTCTAGAAGTCCTAAATTTTGGAAATCTGAATTGGATTATTTGAAGGACAAAAGAGAATGCATGGATGAAATTCAAAAAGTGCTACAAGTGAGCTATAGTGGATTAACAAAGCGTGAGAAGGAAATTTTTCTAGACATTGCATTCTTTTATGAAGGTGAAAGTAAAAATTTCGCCACAAAGATACTAGATGCATGTGGTTTCAGCGCTACTAGTGGGATAGAAATACTTGAAGATAAAGCTCTTATAACTTTTTCAATTAGTAATACAATACAAGTTCATGACTTACTACAACAAATGGCTTTTGATATAGTTCGTAATGACCAAGGAAAGCGTAGCCGATTGAGGGATATTGAAGAAGTTCGCGATGTACTTAAATATAAAAAGGGGGCTGATGTTGTGGAAGGCATAATATTCGATTTGTCTCAAAAATCAAATTTATATGTCAAAGCCGACGTATTTGACATGATGGTTGATTTACGATTTCTTAGACTATATGTACCCTTGGGTAAGAAGAGATTGGCTACCTTGAATCATTCTGATCAAGGCATTAAGCAATTTTCTGATAAACTTAGATACCTTGAGTGGAATGGATACCCTTTCAAGTGTCTTCCAGATCATTTTTGTGCTGAGTTTCTTGTTGAGATTCGCTTGCCGCATAGCAATGTAGAGTATCTCTGGCACGGGATACAGGAACTTATGAATTTAGAGGCAATCGACCTAAGTGAGTGCAAACATTTGACCAACCTCCCTGATTTGTCTGAGGCGTCAAAACTCAGATCGTTGTACCTTTCAGGCTGTGAAAGTTTGTGTGAAATTCAACCTTCTATTTTTTCTAAGGACACGCTTGTTACTCTATTGCTTGATAGGTGCACAAATCTGCAAAGTCTCGTGAGTGAGAAACATTTAAAATCTCTACAAAAGATCAATGTCTACGGATGTTCAAGCCTGAAGGAACTTTTATTGTCCTCTGATTCAATTGAAAGTTTGGATTTAAGCAATACAGGAGTTGAAATATTGCAATCTACAATTAGTGGTATGAGCAATCTTCTGTGGCTCAACTTAGAAGGTTTAAAACTCACAAATCTACCGAAGGAGTTGTCTTGTCTCAGATTACTTACTGAACTTCGACTTTCTAACTGTGATATAGCAACTAAATCGAACTTAGAAGGCATATTTGATGACATGGAATCATTGAAAATACTATATTTAAAAGATTGTGGTAACTTGGTTGAACTCCCTACAAACATCAGTTCTTTATCCTCATTGTATGAGTTAAGACTAGATGGAAGTAGTTTGGAGACGCTACCTTCAAGCATCAAGTTTCTTTCCGAGTTAGAGATTTTATGCTTAGACAATTGCAGAAAGCTTCATTCTCTCCCAGAGCTTCCTCTAGAAATCAAAGAGTTTCGTGCCGAAAACTGCACTTCACTGGTCACTGTATCCAGTTTGAAAACATTTGCAGAAAAGATGAAAGGAAAGGCGAAATACATTTCATTCAAGAATGACATGATGATGAATTTGAATGGACCTTCATTCGACCGGATTGTGGAAGATGTCATATTGACTATGCAGAGCGTTGCATTTCACAACATATTAGTAAGGCAATACAGTTTGGATGCCCACAGCTACAATTATAACAGTGCAGTGGTTTGCTTACCAGGAAGCGAAGTTCCATGCCAGTTCAAATACCGAACATCAGACTCCAAAATAACTATTGGATTTCCTGACATATATTACTCCTTGGGATTCATTTTCTGGGTGGTTATTTCTCCATCCAATAGAATGAAGAATGAGGATGGTAGTGGTGCTAAAATTCAATGTAAATGTTACAGAGAAGATGGCAATAGGGTGGGAATTGTGAATAAGTGGTATAGTGAACCTATTACAAATTTAAACATGGATCATGTTTTTGTGTGGTATGATCTGTACTATTCTCACAGCATACTCGGCTATGGTAAAAGGAATGTTTCATTTGAATTTTTCCTTACAAATGATATGAAGGAACATGATGGCTTCTTCAATATAAAAGAATGTGGTATTTCCCCAATCTTATCAACAGAGTTGCCAAGGCTTTTAAACAAAATAAATTTGAGTGCGGACATGAAATCAGATTTGTATAATGCAGTGAAACTCCAGTCAAAGTGA 3300 0.3652 MSSSHKKNDVFISFRGEDTRETFTSHLYDALKKEKIETYIDYKLQKGDQVWCELVKAIQHSTVSIVVFSENYASSKWCLDELVQILECRKNNGQVVIPVFYRVDPSHIRHQKESYERAFAKYEREIRNDESHEEKVLGWKAALREAANISGWDSSTFKDDSHIIENIVRDVCQKLTLMYPKVLKGIQIDENSKHVDLLVKKVSRIGIWGMGGIGKTTIARLMFVKNIAKYDSVCFMEKVKEESEKLGLTQVRNNIFSELLKRQITASDVIGYTFIKRRLSGRKVFIVLDNVGNAAQLDYLCGELDELGLNSRLIITTRDRHTLRGRVDAIHEVKKWNFEESLNLFIFEAFKQSCAQKGYEGLLERAVEYAGGVPLALKVLGSHFHSRSPKFWKSELDYLKDKRECMDEIQKVLQVSYSGLTKREKEIFLDIAFFYEGESKNFATKILDACGFSATSGIEILEDKALITFSISNTIQVHDLLQQMAFDIVRNDQGKRSRLRDIEEVRDVLKYKKGADVVEGIIFDLSQKSNLYVKADVFDMMVDLRFLRLYVPLGKKRLATLNHSDQGIKQFSDKLRYLEWNGYPFKCLPDHFCAEFLVEIRLPHSNVEYLWHGIQELMNLEAIDLSECKHLTNLPDLSEASKLRSLYLSGCESLCEIQPSIFSKDTLVTLLLDRCTNLQSLVSEKHLKSLQKINVYGCSSLKELLLSSDSIESLDLSNTGVEILQSTISGMSNLLWLNLEGLKLTNLPKELSCLRLLTELRLSNCDIATKSNLEGIFDDMESLKILYLKDCGNLVELPTNISSLSSLYELRLDGSSLETLPSSIKFLSELEILCLDNCRKLHSLPELPLEIKEFRAENCTSLVTVSSLKTFAEKMKGKAKYISFKNDMMMNLNGPSFDRIVEDVILTMQSVAFHNILVRQYSLDAHSYNYNSAVVCLPGSEVPCQFKYRTSDSKITIGFPDIYYSLGFIFWVVISPSNRMKNEDGSGAKIQCKCYREDGNRVGIVNKWYSEPITNLNMDHVFVWYDLYYSHSILGYGKRNVSFEFFLTNDMKEHDGFFNIKECGISPILSTELPRLLNKINLSADMKSDLYNAVKLQSK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03662 1099 ProSiteProfiles TIR domain profile. 6 175 IPR000157 GO:0007165
Vivi7g03662 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 431 IPR027417 -
Vivi7g03662 1099 Gene3D - 337 421 IPR042197 -
Vivi7g03662 1099 Gene3D Ribonuclease Inhibitor 709 880 IPR032675 -
Vivi7g03662 1099 Gene3D Ribonuclease Inhibitor 523 708 IPR032675 -
Vivi7g03662 1099 Gene3D - 176 330 IPR027417 -
Vivi7g03662 1099 Coils Coil 112 132 - -
Vivi7g03662 1099 Pfam NB-ARC domain 204 417 IPR002182 GO:0043531
Vivi7g03662 1099 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 177 - -
Vivi7g03662 1099 SUPERFAMILY "Winged helix" DNA-binding domain 407 509 IPR036390 -
Vivi7g03662 1099 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 708 IPR044974 GO:0006952
Vivi7g03662 1099 Pfam TIR domain 9 180 IPR000157 GO:0007165
Vivi7g03662 1099 SMART till_3 7 149 IPR000157 GO:0007165
Vivi7g03662 1099 Gene3D - 4 175 IPR035897 -
Vivi7g03662 1099 SUPERFAMILY L domain-like 523 865 - -
Vivi7g03662 1099 PRINTS Disease resistance protein signature 615 631 - -
Vivi7g03662 1099 PRINTS Disease resistance protein signature 278 292 - -
Vivi7g03662 1099 PRINTS Disease resistance protein signature 204 219 - -
Vivi7g03662 1099 PRINTS Disease resistance protein signature 370 384 - -
Vivi7g03662 1099 Pfam Leucine Rich Repeat 596 615 IPR011713 -
Vivi7g03662 1099 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 152 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03662 Vivi-Chr7 102419021 102425583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03662 728 876 WRKY Transcription Factor Family AT4G12020 30.323 1.25e-06 51.2