Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03657 ATGGAACCTCGAATTGGGAATAAGTTCCGTCTTGGTCGGAAAATTGGGAGTGGATCTTTTGGTGAGATCTATCTAGGAACCAATATTCAGACGAATGAAGAGGTTGCGGTTAAGCTTGAAAATGCCAAAACCAAGCATCCTCAATTGTTGTATGAATCGAAGCTGTATAAATTACTGCAAGGAGGAACTGGGATACCGAATGCGAAATGGTCTGGTGTTGAAGGAGAGTATAATGTCCTTGTGATGGATTTACTTGGTCCTAGTCTTGAGGATTTGTTCAATTTTTGTAATAGGAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAAATGATAAATCGAGTCGAATTTGTTCATACGAAATCATTTTTACACCGGGATATCAAGCCAGACAATTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTACGTCATTGACTTTGGTCTTGCTAAGAAATTCAGAGACAGTAATAATCAGCATATTCCCTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGGTATGCCAGTATGAATACTCATCTTGGAATTGAACAAAGCCGTAGAGATGATTTAGAGTCACTTGGATATGTTCTTATGTATTTCTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCATCATACTTCCATTATTGCCGGTCACTAAGGTTTGATGATAAACCAGATTATGCATATCTGAAGAGACTTTTGCGTGATCTATTCATCCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTTCCACTCCTCCTTCTCGTGGTATTGGTCTTGCTGCCGGCCCAAGTTCTGGTCTGCCACTAACTTCTGCAAATGCTGATGGACAGTCAGGCGGAAAAGATGGCAGGCATATTGGGTGGTCTTCAACTGATCCTACTCGTAGGAGAAACTCTGGACCTATTGCCATTGATGGAATCTTATCTAGAGAAAAAGCCCCGGTTACAAATGAATTAACTGGATCTAAAGATGCTATGTTGCCAAGTTCGAATTTCTTTCGGCCAAGTGGATCCGCAAGGCAAAGTGCCATCTTAAACAGCAGCCGTGATGCAGTTGTTGACAGTGAGACTGAGCCCTCCTCCCGACCTCCCACGCAGGACCCAAGTCAAGGAGCTATCCGTAAAAGCTCTGGTGCTCAGAGAAGTTCACATATCATGTCATCTGAGCACAACCGAGTATCATCTGGAAGAAACACATCATCAAACATAAAGAATTTGGATTCAACTCTTAGAGGCATCGAGAGTCTGCATCTAAACGACGAGAGGGCACAGTATTAG 1428 0.4202 MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAVKLENAKTKHPQLLYESKLYKLLQGGTGIPNAKWSGVEGEYNVLVMDLLGPSLEDLFNFCNRKLSLKTVLMLADQMINRVEFVHTKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKFRDSNNQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQISTPPSRGIGLAAGPSSGLPLTSANADGQSGGKDGRHIGWSSTDPTRRRNSGPIAIDGILSREKAPVTNELTGSKDAMLPSSNFFRPSGSARQSAILNSSRDAVVDSETEPSSRPPTQDPSQGAIRKSSGAQRSSHIMSSEHNRVSSGRNTSSNIKNLDSTLRGIESLHLNDERAQY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03657 475 SUPERFAMILY Protein kinase-like (PK-like) 5 289 IPR011009 -
Vivi7g03657 475 MobiDBLite consensus disorder prediction 318 456 - -
Vivi7g03657 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Vivi7g03657 475 PANTHER CASEIN KINASE-RELATED 13 430 - -
Vivi7g03657 475 CDD STKc_CK1_delta_epsilon 8 281 - -
Vivi7g03657 475 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03657 475 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03657 475 FunFam Casein kinase I isoform delta-like 1 307 - -
Vivi7g03657 475 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vivi7g03657 475 SMART serkin_6 9 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g03657 475 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Vivi7g03657 475 MobiDBLite consensus disorder prediction 372 456 - -
Vivi7g03657 475 FunFam Putative Casein kinase I 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03657 Vivi-Chr7 102359895 102365326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03657 7 222 EF-hand Containing Proteins AT2G17890 26.339 1.18e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Vivi7g03657 Pkinase 5.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03657 K02218 - gmx:100787808 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07362 2 217725369 217730675 Vivi7g03657 7 102359895 102365326 PCT