Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03612 ATGGATTATATACACGACGTGTTCATCAACTTTAGAGGGAAAGACACACGTCAAAGTTTCGTTTCTCATCTCAATGCCGGCCTCACAAATGCAGGAATCAAGACCTATATCGACAACCAGCTTCACAAAGGAACCGAGCTTGGACCAGAACTGTCACGAGCAATAAAAAGCTCCCGTATATCTATACTTGTTTTCTCCAAAAACTACACTGAGTCTAGAACCTTCCGTTGTGCGCCACCAGAAGGGTGCTTTTGGACAAGCTTTGAGAGCTACTGGAAACTAACATTTGAACAGTTAAAATCACTATGTGGGAATCCTAAATTGTTTTGTCCGGGAAGTGTATTAATCGTTACAACCAGAGATATACGCCTACTTAATTTATTTAAGGTTGATTACGTGGGTACAATGAAGGAGATGGACGAAAATGAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTAGGCAACCTGTTCCGATAAAAGACTTCCATGAACTCTCAAGGAACGTAGTTGCTTATTGTGGAGGATTACCAGTTGCTCTTGAAGTCCTTGGTTCTTACTTGTATGAGAGGACAGAAGAAGAATGGATAAGCGTCCTCTCAAAACTAAAGAGGATTCCCAATGATCAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTAAAAGATGATATGGCAAAGGATATATTTCTTGACATATGCTGTTTCTTTGTTGGCAAGGGCAGAGCCGATGTTACAAAGATCCTAAATGGCTGTGGACTTTATGCAGATATTGGAATAGCTGTTCTCGTAGAGCGGAGCCTTGTAAAAATTGAAAAGAATAACAAGCTTGGAATGCACGGTTTAATAAGAGATATGGGAAGAGAGATTGTTCGAGAAAGTTCAACAAAAGAGCCTGGAAAGCGTAGTAGATTGTGGTTTCGTGAGGATGTTCATGATGTTTTGACAAAAAATACTGGAATAGAAACTGTAGAAGGATTGGTTTTGAAGGTGCAAAGAACCAGTAGAGTTGTCTTAAGTACTGATTCTTTCAAGGAGATGAAGAAACTGAGACTTTTACAACTTGATCATGCCATCCTCATTGGAGATTATCGGTATCTTTCAAAAGAACTGAGATGGATTCATTGGCAAGGATTTACCTTCAACTATATACCCGATGATTTTTATCAGGGAAGTCTAGTTGCTATTGATGTAAAATACAGCAGTATGAAACAAGTGTGGAATGAAACCAAGTTGTTGGATAAACTGAAAATTCTCAATGTTAGTCATTCTAAGTACTTGAAAAGCACTCCTGATTTTTCAAAAGTACCGAATCTAGAAAAGCTCATTATGAAGAATTGTCCAAATTTGTCCGAGATACACAAGTCTATTGGAGATCTTAGGAATCTACTTCTGTTGAATTTGAAGGACTGTACAAGTCTTGGCAATCTCCCAAAGAAGATCTATCAATTGAAATCATTGAAAACTCTTACACTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACATTGTGCAGATGGAATCCTTGACAACACTGAACGCAAAAGATACATCAGTGATTGAAGTTCCGCGTTCAATACTAAGATTAAAAAGCATTGGATTTATATCCCTATGTGGATATGAAGGTTTATCACGTGATGTGTTTCCTCGTCTCATTTGGTCTTGGATGACGCCAGCCATGAATTCCCTACCCTGTATATCTCCATTTGGGGACAGTTCTTTGTCACTAGTTTCCTTGGATGTATCAAGTAATAGTATGGGCTATCAACCGCCAATGCTTAGAAACCTTTCAAAACATAGAAGTGTTTGGATTCAATGCCGGTCAGTGATGCAACTGACTCAAGAATTAAGAAATTTTTTAGATGATCTATATGATGTAAGTTTTACCAAGTTGGAAACAGCATCACATGCATCACTTATCTTAGACATTTCGTTGAAATCGCTTTTGATTGAGATGGGAAATTGTGACATGGTCATCAACACTCTTGGCAAGAGCATATCACAGGGATTTACAACCAATGATTCAAGCAATTTTTGCCTTCCAGATGACAATTATCCTTCTTGGTTAGCCTATACATGTGAAGGACCTTCAGTACTATTTCAAGTTCCTGAGAATAGTCTTAGTCACATAAAGGGAATAGTTTTATGTGTTGTTTATTCATCAACATCTGAAAACACGGCAACTGAATATCTTACTAATGTCTTGATCATAAACTACACAAAATGCACAATCCAAATATACAAGGGAGACACAGTCATGTCTTTTAACAATGAAGATTGGAAGGGTTTAACATCAAATCTAGGACCTGGTGACAATGTGGAGATTTTGGTAGCTTTTAGGCATGGATTGATGGTTAAGGAGACTGTTGTATATCTAATATATAACCATTCAGTTACTGTGGAAACTAGTTCATCAATCAACGTGGAAATGAAGATATCGCCGGAAGTGAACTTGCAGCCATCATCCATTCTGAATATGGAGCCATTAATTGATATGAAAACCGAATCATCACGGAATCCAAATGAGAAAATATTTTCAAGACTTACAAAGAGAATGGGAAAATGTTTGTGCATAAACCAAAATAGAGGCCTCTAA 2601 0.3772 MDYIHDVFINFRGKDTRQSFVSHLNAGLTNAGIKTYIDNQLHKGTELGPELSRAIKSSRISILVFSKNYTESRTFRCAPPEGCFWTSFESYWKLTFEQLKSLCGNPKLFCPGSVLIVTTRDIRLLNLFKVDYVGTMKEMDENESLELFSWHAFRQPVPIKDFHELSRNVVAYCGGLPVALEVLGSYLYERTEEEWISVLSKLKRIPNDQVQEKLRISYDGLKDDMAKDIFLDICCFFVGKGRADVTKILNGCGLYADIGIAVLVERSLVKIEKNNKLGMHGLIRDMGREIVRESSTKEPGKRSRLWFREDVHDVLTKNTGIETVEGLVLKVQRTSRVVLSTDSFKEMKKLRLLQLDHAILIGDYRYLSKELRWIHWQGFTFNYIPDDFYQGSLVAIDVKYSSMKQVWNETKLLDKLKILNVSHSKYLKSTPDFSKVPNLEKLIMKNCPNLSEIHKSIGDLRNLLLLNLKDCTSLGNLPKKIYQLKSLKTLTLSGCSKIDKLEEDIVQMESLTTLNAKDTSVIEVPRSILRLKSIGFISLCGYEGLSRDVFPRLIWSWMTPAMNSLPCISPFGDSSLSLVSLDVSSNSMGYQPPMLRNLSKHRSVWIQCRSVMQLTQELRNFLDDLYDVSFTKLETASHASLILDISLKSLLIEMGNCDMVINTLGKSISQGFTTNDSSNFCLPDDNYPSWLAYTCEGPSVLFQVPENSLSHIKGIVLCVVYSSTSENTATEYLTNVLIINYTKCTIQIYKGDTVMSFNNEDWKGLTSNLGPGDNVEILVAFRHGLMVKETVVYLIYNHSVTVETSSSINVEMKISPEVNLQPSSILNMEPLIDMKTESSRNPNEKIFSRLTKRMGKCLCINQNRGL 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03612 866 Gene3D - 138 222 IPR042197 -
Vivi7g03612 866 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 75 IPR035897 -
Vivi7g03612 866 SMART till_3 4 125 IPR000157 GO:0007165
Vivi7g03612 866 SUPERFAMILY L domain-like 329 615 - -
Vivi7g03612 866 ProSiteProfiles TIR domain profile. 3 156 IPR000157 GO:0007165
Vivi7g03612 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 233 IPR027417 -
Vivi7g03612 866 Pfam TIR domain 5 73 IPR000157 GO:0007165
Vivi7g03612 866 Gene3D Ribonuclease Inhibitor 311 668 IPR032675 -
Vivi7g03612 866 SUPERFAMILY "Winged helix" DNA-binding domain 209 315 IPR036390 -
Vivi7g03612 866 Gene3D - 1 77 IPR035897 -
Vivi7g03612 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 73 IPR044974 GO:0006952
Vivi7g03612 866 PRINTS Disease resistance protein signature 482 498 - -
Vivi7g03612 866 PRINTS Disease resistance protein signature 173 187 - -
Vivi7g03612 866 Pfam NB-ARC domain 113 211 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03612 Vivi-Chr7 101815728 101818975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03612 427 539 WRKY Transcription Factor Family AT5G45050 30.973 7.07e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g03612 - - vvo:131619920 1654.03