Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g03611 ATGTCTCATCTTCCTTTTGTCGCTCCTCCTTCCTCTCCAAGTTCCGGACCCCAATGGATCTACGACGTTTTCATCAATTTCAGAGGAAAAGACACTCGTGCCAATTTCGTTTCTCATCTCTATGCCGCACTCTCAAACACTGGAATCAACGCTTTTCTTGACGATCACAATCTTCAAAAGGGAAAGAAACTTAGACCAGAATTAGTGCGAGCAATTCAAGGTTCTCAGATATCCATCGTTGTTTTCTCCCAAAACTACGTTAAATCTAATTGGTGTCTTGATGAACTCAAACTAATCATGCAATGCCACGCTATGGGTCATCAGCTTGTTATGCCTGTATTTTGCGGGATTACCCCTTCGGATATACGTCGATATACTGACAAAACTATTGCACGAACACTCACCGACGCTTCTCATTTGGCTGGTTGGGATATGAAAAATTACAGTAATGAAAGCAGTGTTGTGAAGGAAATTGTGGCCCATGTTTTGAGAAAACTAGACAAAAGATACTTACCTGTCCCAGATTTTCCAGTTGGACTAGAATCCCGTGCGGAACAGTTGATTCGGTTTTTAAGACAGAATACAAGAGGAGTTTGTTTAGCAGGGATTTGGGGAATGGGAGGGATTGGGAAAAGCACCATTGCTAAAGTTGTCTACAATAAACTCTATTCTGAATTTGAAGATCAGAGCTTCCTTGCTAGTATTAGAGAAGTTTGGGAGAGAGATAGGGGGCGAATCGATTTACAAGAACAACTTCTTTCAGATATCCTCAAAACAAGAAATATAAAGGTGCATAATATTGAGTGGGGAAAAGCTATGATCAATGAAAGACTTTGCACAAAACAGGTACTTGTTGTACTCGATGATGTGAGTACGCGTGAGCAATTAAATGCACTATGTGGAAGTCGAAATGGGATTGGTCCAGGAAGTATAATAATCATCACAACAAGAGACGTGCGTCTACTTGATTTTCTTGGAGTTGACTTTGTTTATGAAGCGGAAGGATTGAATGCACGGGAGTCCCTTGAGCTTTTCAGTCGGCACGCGTTTAGGGAGGCGAGTCCAACTGAAGGTTTCTTTAGTCTCTCGGGAGATGTAGTTTCCTATTGTGGTGGACTACCATTAGCTCTTGAAGTCCTTGGATCTTATTTGTTCAAGAGGAGAAAACAAGACTGGAAAAGTGTATTATCAAAGCTAGAAAAGATTCCCAATGATGAAATACATGAGAAACTAAAAATAAGCTTCGATGGTTTAGAGGATCGCATGGAAAAGGATATATTTCTTGATGTGTGTTGTTTCTTTATCGGTAAGGACAAAGCTTATGTTACAGAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATAACATTGCTGATAGAAAGAAGCCTCATAAAAGTTGAAAAGAATAATAAGCTTGGCATGCATTCTTTGCTACGAGACATGGGTAGAGAAATTGTTCGTGAAAGTTCACCTGAAGAGCCTGAGAAGCGTAGTCGATTGTGGTGTCATGAGGATGTAGTTGATGTATTGACTGACCATACCGGAACAAAAGCCATTGAAGGATTGGTTATAAAGTTGCAAATGACCAGTAGCCTTTGCTTCGATACTATTGCTTTTGAGAAAATGAAGAGATTGAGATTGTTGCAACTTGATCATGTACAACTCATTGGAGATTATGAGTGTTTTCCGAAGCACCTGAGATGGCTTTCTTGGCAAGGGTTTCCTTTAAAATACACGCCAGAAAACTTTAATCAGAAAAATCTAGTTGCTATGGACTTAAAACACAGTAATCTCACACAAGTTTGGAAGAAGCCTCAGTTGTTGCAGATGCTAAAAATTATCAATCTCAGTCATTCTAAGTACTTAAAAAGAACCCCTGACTTTTCATTCTTGCCGAACCTAGAAAATCTCATTATGAAGGATTGTCGAAATTTGTCCAAGGTGCACTCATCCATTGGAGATCTCAAGAATCTTCTTTTGATAAACTTGAAGGACTGTACAAGCCTTAGCAATCTCCCTAGAGAGATATATCAACTGACATCAGTGAAAACTCTCATCCTTTCCGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACGTGGGGCAGATGGAATCCTTGACAACACTGATTGCAAAAGATACATCCGTAAAAGAAGTTCCCCATTCAATACTACGATTAAAAAGTATTGGATATATATCCCTATGTGGATACCAAGGATTATCACGTGATGTTTTTCCATCTCTCATTAGGTCTTGGATGTCACCAACAATGGATTCCTTAACTCACGTTCCTCCTTTTGGTGGCTTGTCAATGTCTCTTATTTCCCTGAACTTAGAGACTAGTAATTTGGGTTTGGTCTATCAATCAGAAATACTTAGCAGCTGTTCAAAACTAAGAAGTTTTTCTGTACAATTTGATTCAGAGATTCAACTGAAAGAAGAATTCCGAAAACTTCTTGATGATCTATATGGTGCAGGTCTTACTGAACTGGGAACATCACATGCATCACAAATTTCAGATCTTTCCTTGAGATCTGTTTTGATTGGAATCGGAAGCTGCCACATTGTCATGGATACTCTTGAGAAGAGCTTATCACAGGGATTAGCAACCGATTCTAGTGATTCGTTCCTTCCAAGTGACAATTATCCTTTTTGGTTAACGTATAAAGGTGAAGGATCTTCGGTACTTTTTCAAGTGCCTGGGGATAGTGGTGGTTGTTGCATGAAAGGAATAACTTTGTGTGTTCTTTATTCATCAACACCTGAAAACTTGGGAACCGAATGTCTCATTAGTGTCTTGATCATTAATTACACAAACTTCACTATCCATATTTACAAACAAGACACCGTTATGTCGTTTAATGATGAAGATTGGCAAAGCATGGTATTAAATTTAGGAGTTGGTGACAATGTGGAGATTGTTATAGCTATTGGGAATGGATTGATTGTTAAGGAGACAACTGTCTATCTAATATATGATCCTTCAAATGGTATTGAAATTGAGCCATCAAATATTATGGAGGTCGACCCATTGACCGACACAAAAATAGAGTCATTACAAGAAGTGGAAGTGCAACCATCACCTAATGCGAGAACGGAGCCATCATCTGAAGTGGCACTGCAACTATCACCTAAAATAAAAATGGAACCATTACCGAAAACAAATAGAAAAATCTTTACAAGACTTGCAAAGAAAGTGGGAGAATGTTTATGCTTGAACCAGAATTGA 3234 0.3887 MSHLPFVAPPSSPSSGPQWIYDVFINFRGKDTRANFVSHLYAALSNTGINAFLDDHNLQKGKKLRPELVRAIQGSQISIVVFSQNYVKSNWCLDELKLIMQCHAMGHQLVMPVFCGITPSDIRRYTDKTIARTLTDASHLAGWDMKNYSNESSVVKEIVAHVLRKLDKRYLPVPDFPVGLESRAEQLIRFLRQNTRGVCLAGIWGMGGIGKSTIAKVVYNKLYSEFEDQSFLASIREVWERDRGRIDLQEQLLSDILKTRNIKVHNIEWGKAMINERLCTKQVLVVLDDVSTREQLNALCGSRNGIGPGSIIIITTRDVRLLDFLGVDFVYEAEGLNARESLELFSRHAFREASPTEGFFSLSGDVVSYCGGLPLALEVLGSYLFKRRKQDWKSVLSKLEKIPNDEIHEKLKISFDGLEDRMEKDIFLDVCCFFIGKDKAYVTEILNGCGLHADIGITLLIERSLIKVEKNNKLGMHSLLRDMGREIVRESSPEEPEKRSRLWCHEDVVDVLTDHTGTKAIEGLVIKLQMTSSLCFDTIAFEKMKRLRLLQLDHVQLIGDYECFPKHLRWLSWQGFPLKYTPENFNQKNLVAMDLKHSNLTQVWKKPQLLQMLKIINLSHSKYLKRTPDFSFLPNLENLIMKDCRNLSKVHSSIGDLKNLLLINLKDCTSLSNLPREIYQLTSVKTLILSGCSKIDKLEEDVGQMESLTTLIAKDTSVKEVPHSILRLKSIGYISLCGYQGLSRDVFPSLIRSWMSPTMDSLTHVPPFGGLSMSLISLNLETSNLGLVYQSEILSSCSKLRSFSVQFDSEIQLKEEFRKLLDDLYGAGLTELGTSHASQISDLSLRSVLIGIGSCHIVMDTLEKSLSQGLATDSSDSFLPSDNYPFWLTYKGEGSSVLFQVPGDSGGCCMKGITLCVLYSSTPENLGTECLISVLIINYTNFTIHIYKQDTVMSFNDEDWQSMVLNLGVGDNVEIVIAIGNGLIVKETTVYLIYDPSNGIEIEPSNIMEVDPLTDTKIESLQEVEVQPSPNARTEPSSEVALQLSPKIKMEPLPKTNRKIFTRLAKKVGECLCLNQN 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g03611 1077 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 724 IPR044974 GO:0006952
Vivi7g03611 1077 SMART till_3 20 165 IPR000157 GO:0007165
Vivi7g03611 1077 Pfam NB-ARC domain 182 404 IPR002182 GO:0043531
Vivi7g03611 1077 Gene3D Ribonuclease Inhibitor 521 849 IPR032675 -
Vivi7g03611 1077 SUPERFAMILY L domain-like 476 807 - -
Vivi7g03611 1077 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 126 IPR035897 -
Vivi7g03611 1077 Pfam TIR domain 21 167 IPR000157 GO:0007165
Vivi7g03611 1077 Gene3D - 6 140 IPR035897 -
Vivi7g03611 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 429 IPR027417 -
Vivi7g03611 1077 ProSiteProfiles TIR domain profile. 19 166 IPR000157 GO:0007165
Vivi7g03611 1077 Gene3D - 154 326 IPR027417 -
Vivi7g03611 1077 Gene3D - 335 419 IPR042197 -
Vivi7g03611 1077 PRINTS Disease resistance protein signature 277 291 - -
Vivi7g03611 1077 PRINTS Disease resistance protein signature 679 695 - -
Vivi7g03611 1077 PRINTS Disease resistance protein signature 200 215 - -
Vivi7g03611 1077 PRINTS Disease resistance protein signature 370 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g03611 Vivi-Chr7 101806194 101813512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g03611 21 728 WRKY Transcription Factor Family AT4G12020 31.090 7.22e-82 291